AMCG00003783


Basic Information

Item Value
gene id AMCG00003783
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 18163626 ~ 18175704 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003783
TTAAGTGAATTACCCAATTCCCCCCAAAAAGACACTTTGTCCAGGTTGAAATTCATATTATAATTGTAGCATGGAACacttaaacaaatcaaagcagTTTAACTTATTGGGTCCATAATCAAATTTGTGTCCAAAAAACGAATCCAAACAGTAGATTTAAGATCCAATACAACTTCCTCTGCTTTGATGTCTGACTGGTCAGAATGGGAGCaagagtgagagggagaaagagagagagggagagagggagagggagagagagggagggggagagagcggGGTAGCTGGTATTTTGGCAGGTTTTCTTCACACTCAGCAGCCCCGGAGTTTCTCCACTCCTGCCGACTCGTATCTCCCGAGGAATCCCGTCaggtttttctttcccttttgcgcgcctattatttatattatgatttaaCTTCACTGTTCATTACAGGATCCGAGATGCTGACTTCATaaggataatatatatatgtatatatatatatatattaatttatgtgtgtatttgtatatatccaTATGCAGAGAAACAAGCCTCCCCAGGAATCCCTGCCTGGAATACAAAGGACTTCAATGCGCAGAAGGAGACCTTGACGAAGACGGTGGTTGCTGTATCTCCAGTAGACCTCGCATGGTCAGTCCTGGGCAGTGGACATGTACCAAGGCATAGCGATGACCACCAGCCCCGGCCCCCCGTCCTACGAGTCCAGTTTCTCACACAGCGCCTCTGCCACCCCGCCGGTCTACGTGCCCCCCACCCGGGTCACCCCCATGGTCCCGGCGCTGTCTTACCTTCAGACGCACGCCGGCTCCCAGCACACCAGCTCGGCGCCCAGTCCCTCTGCCTGGGCATCGTCTGCCGCGGAGCCGGGGGCTTCCTACACGGCGGGCACTGCTCTCCAGTCCTCCGTGTCGCCCCGCTTCACCTTCTCCACCAGCCCGCCTGTCACAGTGGCTGCTGCCCGGGAGAACCCGACCTACTCCAGCCCTCTGAGCGTCTCTGTGCCCGGCAGGGAGCCGTATGGGGCCAGGGCCCTCGGCGGCTCTTACCACGGCCCCTACCCGGCCTATGTGAGTCCCAGTATGGGGGCATCTTGGACCGCATCTCCATTTGACAGCTCTGTGCTGCACAACCTACAGACAGCCGGCGTCCAGACCCCCAGACACCCCAGCATAGAGCACACAAATACGGTTGGTGCCTGGGTGGAAGAGGTCCCCCGGCCACTGGCCATGAAGAAGGAAGGGATCCAGACTCGAAAACGCAAACCCAAGAACCTCAATAAACCCAAACAACCAGGACCCCCCAGCTCAGAGAGCCATACTCCCACCAGCACTCCCAGCACAGAGGAGCTGAGGCAAATTAAAATCGAACCCGGGACCACCCCCCACTACAGCCACAGCACACACCCTCAGGTCCCCTCTGTCCCAGGGTTCATGGTGACCCAGAGCAGCTCCTCCAGCCTGAAGCTCTCGCCCAGCAGCCACACTGCACCTTCCTGCTCAAAACCTGAGTCCTGGAGCAGCCTGGTCCTGGCCTAGCGATCTGCATCTCTCCCTGGAGGCCGCTGGACTGCACAGCCTAGCAGAAGAAGCCCAGTCCGTCTCCAGAGAGAGTCAGCACTACCACAGTCCAGTATTAGTATAACAACAAGTGCCTTAGCAGGGTCTGATCCAATCAACATGTAACACAGACATGGTTTCTCTGCCCTGTGTCCgcagcactctctctctgtctcctggcAACCCAGACCTGGAAGCGTTCCCACTTTGATTTTGTTCATCTCTAGACACGCCTTCCAGACTCTGTTGTGAATATAAAGTGTGAATGTAGACCTGAGTAATATGGAAACTCCactcttcctgttttttgttggttttcttttgtctcTTGGACTAATTCAGGATCCCACAggagcacagtgcagtacagtaaagGTGTGATGTGAGTCAGACATTAACTCAATAGTTGCAGAACTCTCAGAAACAGAGGTTCAAAGCCCTTGAAAACAGAGGAAGTGAAGACACCGGACAATAATCAGATCTGCTCCTGAGCATTCCTTTCAGATCCTTTATGTAGAACAATAATGCTGTGGTCACAGTGAACCGACACGACATTGTCTGACTGGGTGAAAAGATTTGCAGTGATTCTCGAAATTACACACCACAAACCTGTTCGTTAggagacaagaaaacaaaatgcagcacaCAATGGTACAGGATGAGTATAAAGTAGTTTCAGCTTCAAGCCAAGGTTCTCCATTTGTTTAGTCCTGCTGAAGAAATTACAACTTACCCTCACTTTAAAGACTGCGCGTCAAAGGCTGGCGTTGGACTGACTCTCCAATCACAGTGTTACATCACAATCCTCGAGCTTCTCGTCATTTCACCGCCCTGACATTCACAAGAAGCTAAAGCCAAGATGCACATACTCAAGCTAACCCTGAACACTTGTGAAATGCTATTGTTCTTACCTTTGAGGTCTAGAAGGTCCTCCTCACTATCAGTCTCAAACGTCCCAGAAATCCTGCAACACTCCTCTAGCGACAGGGTGAGACCCTGCGGCCGTCTTCCACACTGTCCTCTGTCCTGTCCAGGTCCCTGTGTTGCGGTCTGAAGCTCGACCCCCCACAGCGCTCCTCAGTGGGGTCTGGCAGAGGAGGCTACGTGTTGCCCCCACTGTGTTGTCTCGGTCCTGTTTCAGTGCTGTCCTTCctctagtatttattttaatgagaactTTTTGAATTGACAGTTGAGCTTGTTTCGTCTGAATTTGTGACAGTGCCAGCGAGAGACGAGTCGCAGCAGTCAGTGGAAGACAACAGGGCTCAGAGCTCACCAGGCTTAAGGCTTGTTGTTTTAATCCAGACTGCAGAAAGTATAGCTTTCAGCATGCTATTATGTTTCCACTGTTTCTAATAATTTATGGAGGttagtttaatgtaattaaatgcattcataaacATTCATGTATACAAAATTGACTCCATTATGTCCTTTTTATGTATAGTTTTGATATATTTggttaaactttaaaaataaaaggaaaaataaaaatagaaatatatatattcactaaaGGTGcaagatctttattgtaaagttGCACTAATAATGAGCTTGTCATGGTTTTGTCTGcacaaatactaaaataaataaaggacatAAAACTGAAGAGACagcacttattttattaattaatgtttctgtTGTCACTGTAACCCTCAGTGTCAGACTAAtaccatttttaaatctgaGGCCGGAAATGTGCTATAGTTGGACTCCTGCTGTTACCATACAGGTTGGCTTCAATTTCAGTTCCTTGAATCAAAATTAGCCGTTTTGTTCAGCCCTGGAAAACCTCAAAAGTGAAGTTCATGGTATCAGGAGAAACTTCTGCCTGTTTTATCCGCGCTGAAGGTTCCTCTTTCTGCTCCTGTCAGTCGAGGGTCCTCTGCATCTCAAAGGCCTTttgcacaaagcaaaacaaatagtGCATAATCTATTTGATGTattctatataaatacataaaataaatgacattaaacatttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003783 True 3557 mRNA 0.48 5 18163626 18175704

Neighbor

gene id symbol gene type direction distance location
AMCG00003781 LOC103364986,LOC107735240 coding downstream 1658 18156858 ~ 18161968 (-)
AMCG00003780 NA coding downstream 39331 18105088 ~ 18124295 (-)
AMCG00003778 LOC107594834 coding downstream 136000 18004171 ~ 18027626 (-)
AMCG00003777 NA coding downstream 162812 17970812 ~ 18000814 (-)
AMCG00003776 NA coding downstream 266711 17889983 ~ 17896915 (-)
AMCG00003789 NA coding upstream 33997 18209701 ~ 18215100 (-)
AMCG00003788 H3F3A,h3f3b,LOC105909691,LOC102696298,LOC107388308,LOC101073377,LOC107572204 coding upstream 40082 18215786 ~ 18220738 (-)
AMCG00003791 eva1a,LOC107593306,LOC107719434 coding upstream 47041 18222745 ~ 18226922 (-)
AMCG00003793 NA coding upstream 72351 18248055 ~ 18275457 (-)
AMCG00003792 NA coding upstream 104419 18280123 ~ 18287152 (-)
G3170 odc1,LOC107687948,LOC107753348,LOC107758719,LOC107687839 non-coding downstream 222914 17935840 ~ 17940712 (-)
G2972 NA non-coding downstream 904083 17257937 ~ 17259543 (-)
G2973 NA non-coding downstream 908861 17254271 ~ 17254765 (-)
G2902 NA non-coding downstream 1121077 17041437 ~ 17042549 (-)
G2903 NA non-coding downstream 1166022 16996790 ~ 16997604 (-)
G3257 NA non-coding upstream 234166 18409870 ~ 18418066 (-)
G3266 NA non-coding upstream 263397 18439101 ~ 18439510 (-)
G3270 NA non-coding upstream 369649 18545353 ~ 18545976 (-)
G3354 NA non-coding upstream 699878 18875582 ~ 18878573 (-)
G3374 NA non-coding upstream 774068 18949772 ~ 18950252 (-)
AMCG00003782 ctsb other downstream 11245 18146660 ~ 18152381 (-)
AMCG00003784 NA other downstream 20945 18135379 ~ 18142681 (-)
G3181 NA other downstream 218684 17942577 ~ 17944942 (-)
AMCG00003751 NA other downstream 1023244 17137248 ~ 17140382 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other downstream 1292151 16868332 ~ 16871475 (-)
AMCG00003825 NA other upstream 1186114 19361818 ~ 19373225 (-)
G3517 LOC101154678 other upstream 1249259 19424963 ~ 19425366 (-)
G3523 NA other upstream 1268312 19444016 ~ 19506753 (-)
AMCG00003893 NA other upstream 5353815 23529519 ~ 23533882 (-)
AMCG00003896 tmem181 other upstream 5564881 23740585 ~ 23757796 (-)

Expression


Co-expression Network