Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003785 |
| gene name | mrpl19 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 18276458 ~ 18279829 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| mrpl19 | Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL19 (mitochondrial ribosomal protein L19). |
| description |
|---|
| PREDICTED: 39S ribosomal protein L19, mitochondrial |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02884 | RP-L19, MRPL19, rplS; large subunit ribosomal protein L19 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003785 | True | 1502 | mRNA | 0.45 | 5 | 18276458 | 18279829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003787 | tram2,LOC106607554 | coding | upstream | 67661 | 18202437 ~ 18208797 (+) |
| AMCG00003786 | NA | coding | upstream | 76930 | 18194283 ~ 18199528 (+) |
| AMCG00003771 | NA | coding | upstream | 305868 | 17954298 ~ 17970590 (+) |
| AMCG00003775 | NA | coding | upstream | 326319 | 17942587 ~ 17950139 (+) |
| AMCG00003774 | LOC107589773 | coding | upstream | 337560 | 17933862 ~ 17938898 (+) |
| AMCG00003790 | NA | coding | downstream | 9071 | 18288900 ~ 18320263 (+) |
| AMCG00003798 | NA | coding | downstream | 68062 | 18347891 ~ 18348131 (+) |
| AMCG00003797 | NA | coding | downstream | 68306 | 18348135 ~ 18349366 (+) |
| AMCG00003795 | hdac2 | coding | downstream | 118426 | 18398255 ~ 18419500 (+) |
| AMCG00003800 | NA | coding | downstream | 343050 | 18622879 ~ 18668138 (+) |
| G2967 | NA | non-coding | upstream | 1020008 | 17254266 ~ 17256450 (+) |
| G2945 | LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 | non-coding | upstream | 1066417 | 17208035 ~ 17210041 (+) |
| G2861 | NA | non-coding | upstream | 1342438 | 16868299 ~ 16934020 (+) |
| G2836 | NA | non-coding | upstream | 1677129 | 16599058 ~ 16599329 (+) |
| G2833 | NA | non-coding | upstream | 1679089 | 16593264 ~ 16597369 (+) |
| G3265 | NA | non-coding | downstream | 158977 | 18438806 ~ 18439666 (+) |
| G3269 | NA | non-coding | downstream | 265155 | 18544984 ~ 18545538 (+) |
| G3370 | NA | non-coding | downstream | 665753 | 18945582 ~ 18946131 (+) |
| G3373 | NA | non-coding | downstream | 669925 | 18949754 ~ 18950254 (+) |
| G3375 | NA | non-coding | downstream | 671423 | 18951252 ~ 18971124 (+) |
| G3108 | NA | other | upstream | 124144 | 18146660 ~ 18152314 (+) |
| AMCG00003779 | ctsb,catb,LOC107381178 | other | upstream | 133825 | 18131919 ~ 18142633 (+) |
| G3047 | NA | other | upstream | 592470 | 17681817 ~ 17683988 (+) |
| AMCG00003744 | NA | other | upstream | 1233864 | 17032570 ~ 17042594 (+) |
| AMCG00003712 | extl3,LOC106571659,LOC106608199 | other | upstream | 2236818 | 16024871 ~ 16039640 (+) |
| AMCG00003828 | ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 | other | downstream | 992136 | 19271965 ~ 19397686 (+) |
| G3751 | NA | other | downstream | 3269372 | 21549201 ~ 21549533 (+) |
| G3771 | NA | other | downstream | 3466021 | 21745850 ~ 21760630 (+) |
| AMCG00003853 | NA | other | downstream | 3610694 | 21890523 ~ 21901865 (+) |
| G3799 | med23 | other | downstream | 3642807 | 21922636 ~ 21923787 (+) |
