AMCG00003786


Basic Information

Item Value
gene id AMCG00003786
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 18194283 ~ 18199528 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003786
ATGGAGCCCGCACCGGGAGAGGTGCTCGGCCTGCGAGCGGAGCTGCCCCCGTGGGACGTGCCCGTGACCTACAGCCTCGTGCACTGCCTTCTGGTTGGCCAGCTGTGGTGGGCCGGGTGGGTCCTGGGCCTGTCACTGCCGGCGGTTGGGGTTCAGGTGCTGAGCTTCCTGTGGTTCCTGGCCGACGGAGACAAGAGGAAGGGGAGATTATTTGTGGTGCACTGCCTACAGCTGGGGATCTACAAAAGGTTGTGGGACTGTGCGTGCTGTGCTGGGCGGCGGGGTGCGGATGAGGAGCTGGGTGTGGCCATAATGCGGAAGGCTGATGTGTCTGCGCTCCGCCTGCTGGAGGCGCTGCTGCTCTCCCTTCCCCAGGCGCTGCTGCACACCTACCTGCTCCTGAGCAGTGATGCTGGCCTGCTCTCCACAGTGGCGGCGTGCAGTGCTGCGTGCCTGCTGTCCCTGTGCTGGGCGCTGGTCCTGTACAGCTGGGCCTGTGTGCTGATCCGACCTGGGCACCTGGCCTTGCCCCCGGCTTCACTGCTGTGCCAGCTGCTGTGGAGGGTGGGCACTGTGGGCGCCAGGGTGGTCAGCCTCGCCTTCTTCACCAGGGTGTTCCGCTGGTGGGTCTACCCAGTGGCAGGCCTGCACTGGCTGACCGCCTCCTTCTGGCTGGTGTCCCAGCAGACGGACATCTGCCCTGGGACGTGGCGCTGGCGTCTGTGGAACGCGGTCATGGGTGTGGTGCATGTCTTCTGCTTCCTCAACTTGAAGGACGGCCCCTCCCGCTTCCGCATGGCCGGGTTCTACGTGGTGATGCTGCTGGAGAACACCACCCTGGTTCTGTCTGCCTCCGACTTCCTCAGCGCCGCATCCTGGGACAGCGTGGGGGTCCTTTCAGCCATGCTGGGAAGCTTCCTCCTGGGCATCTTCTCTCTGGTGGTGTATTACCACTTCCTTCACCCCAAGTCCACAGAGATCTCTCACAGCCTGTGGGGTGGCCCAGGgggcagtgcatgctgggagaagGGTGAGTTGTCGTTCTCTCTGGGAGACAAGATGGCAGCCGCTCCCCCCCTGCACGTCACTGGCAGTTTGTCTCTGAGCGGGCTGGCCGGCTCCCTACTGGGGCCCCCGGGCAGCTACGGCTCGGAGTCCCAAGGTGAGAGTGGGCACCACCATTGGCTGCTGCTGCGCTTGGCACTGAAGACAGGAGACCGGGGCAAGATCAGCCAGGCCTACGGGGCGGGGGCGGTAGAGGCCATTCTAAATGTGGAGCTGTACCACCCCGAGACAGATGATATGTCCTCTCCGGCCTCCGACTGGGATCATGGCATTGTCCCCTTCACGGAGGAGTGGAGGGAAGATCCGCAGGGGCCTGACCAAAAGCCCTCCCCTGAGGATGAGCAGCAGGGGGAGCAAGAGGAGGAGAGGACAGAGCTGGGCTCCCCGCTGGACTCCCAGGAGTTGGAGTTCCAGAGGGGATCCCCGGAAGGGAAGTCAGTGCTGGGGGACAGTCCCGAGCTTAACGTCTGTCCCACCGAGTCCAGCTCTACCCTGTACTTCAGCGCTGACCCCCAGTCTCCCAGCAGCGCCAGCAATCCGGGGCTAGACAGAGACGGTGGGGGGGACAGCGTGGCCGAGCTCAGCCCTATCTCCAGTGAGCCCGTCGCCCTGCGGGGGGGCAGGGTCTGGCTGGGCAGGGCCGAGCCACGCTTCACCTCCACCCCCAAACAGGAGACCAGTCCCCAGGAGCAACAGGGCACACACATGGCAGGGGCCCGCAGACAGCTGCTGCcctggaggagagaggaggcGGGGCACTCGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003786 True 1830 mRNA 0.65 7 18194283 18199528

Neighbor

gene id symbol gene type direction distance location
AMCG00003771 NA coding upstream 223693 17954298 ~ 17970590 (+)
AMCG00003775 NA coding upstream 244144 17942587 ~ 17950139 (+)
AMCG00003774 LOC107589773 coding upstream 255385 17933862 ~ 17938898 (+)
AMCG00003772 LOC104943415 coding upstream 278220 17899908 ~ 17916063 (+)
AMCG00003773 LOC106571177 coding upstream 305440 17881204 ~ 17888843 (+)
AMCG00003787 tram2,LOC106607554 coding downstream 2909 18202437 ~ 18208797 (+)
AMCG00003785 mrpl19 coding downstream 76930 18276458 ~ 18279829 (+)
AMCG00003790 NA coding downstream 89372 18288900 ~ 18320263 (+)
AMCG00003798 NA coding downstream 148363 18347891 ~ 18348131 (+)
AMCG00003797 NA coding downstream 148607 18348135 ~ 18349366 (+)
G2967 NA non-coding upstream 937833 17254266 ~ 17256450 (+)
G2945 LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 non-coding upstream 984242 17208035 ~ 17210041 (+)
G2861 NA non-coding upstream 1260263 16868299 ~ 16934020 (+)
G2836 NA non-coding upstream 1594954 16599058 ~ 16599329 (+)
G2833 NA non-coding upstream 1596914 16593264 ~ 16597369 (+)
G3265 NA non-coding downstream 239278 18438806 ~ 18439666 (+)
G3269 NA non-coding downstream 345456 18544984 ~ 18545538 (+)
G3370 NA non-coding downstream 746054 18945582 ~ 18946131 (+)
G3373 NA non-coding downstream 750226 18949754 ~ 18950254 (+)
G3375 NA non-coding downstream 751724 18951252 ~ 18971124 (+)
G3108 NA other upstream 41969 18146660 ~ 18152314 (+)
AMCG00003779 ctsb,catb,LOC107381178 other upstream 51650 18131919 ~ 18142633 (+)
G3047 NA other upstream 510295 17681817 ~ 17683988 (+)
AMCG00003744 NA other upstream 1151689 17032570 ~ 17042594 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 2154643 16024871 ~ 16039640 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 1072437 19271965 ~ 19397686 (+)
G3751 NA other downstream 3349673 21549201 ~ 21549533 (+)
G3771 NA other downstream 3546322 21745850 ~ 21760630 (+)
AMCG00003853 NA other downstream 3690995 21890523 ~ 21901865 (+)
G3799 med23 other downstream 3723108 21922636 ~ 21923787 (+)

Expression


Co-expression Network