Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003798 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 18347891 ~ 18348131 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003798 | True | 183 | mRNA | 0.45 | 2 | 18347891 | 18348131 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003790 | NA | coding | upstream | 27628 | 18288900 ~ 18320263 (+) |
| AMCG00003785 | mrpl19 | coding | upstream | 68062 | 18276458 ~ 18279829 (+) |
| AMCG00003787 | tram2,LOC106607554 | coding | upstream | 139094 | 18202437 ~ 18208797 (+) |
| AMCG00003786 | NA | coding | upstream | 148363 | 18194283 ~ 18199528 (+) |
| AMCG00003771 | NA | coding | upstream | 377301 | 17954298 ~ 17970590 (+) |
| AMCG00003797 | NA | coding | downstream | 4 | 18348135 ~ 18349366 (+) |
| AMCG00003795 | hdac2 | coding | downstream | 50124 | 18398255 ~ 18419500 (+) |
| AMCG00003800 | NA | coding | downstream | 274748 | 18622879 ~ 18668138 (+) |
| AMCG00003799 | tube1 | coding | downstream | 322593 | 18670724 ~ 18682733 (+) |
| AMCG00003804 | fyn,LOC103458010,LOC106529781 | coding | downstream | 353512 | 18701643 ~ 18779760 (+) |
| G2967 | NA | non-coding | upstream | 1091441 | 17254266 ~ 17256450 (+) |
| G2945 | LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 | non-coding | upstream | 1137850 | 17208035 ~ 17210041 (+) |
| G2861 | NA | non-coding | upstream | 1413871 | 16868299 ~ 16934020 (+) |
| G2836 | NA | non-coding | upstream | 1748562 | 16599058 ~ 16599329 (+) |
| G2833 | NA | non-coding | upstream | 1750522 | 16593264 ~ 16597369 (+) |
| G3265 | NA | non-coding | downstream | 90675 | 18438806 ~ 18439666 (+) |
| G3269 | NA | non-coding | downstream | 196853 | 18544984 ~ 18545538 (+) |
| G3370 | NA | non-coding | downstream | 597451 | 18945582 ~ 18946131 (+) |
| G3373 | NA | non-coding | downstream | 601623 | 18949754 ~ 18950254 (+) |
| G3375 | NA | non-coding | downstream | 603121 | 18951252 ~ 18971124 (+) |
| G3108 | NA | other | upstream | 195577 | 18146660 ~ 18152314 (+) |
| AMCG00003779 | ctsb,catb,LOC107381178 | other | upstream | 205258 | 18131919 ~ 18142633 (+) |
| G3047 | NA | other | upstream | 663903 | 17681817 ~ 17683988 (+) |
| AMCG00003744 | NA | other | upstream | 1305297 | 17032570 ~ 17042594 (+) |
| AMCG00003712 | extl3,LOC106571659,LOC106608199 | other | upstream | 2308251 | 16024871 ~ 16039640 (+) |
| AMCG00003828 | ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 | other | downstream | 923834 | 19271965 ~ 19397686 (+) |
| G3751 | NA | other | downstream | 3201070 | 21549201 ~ 21549533 (+) |
| G3771 | NA | other | downstream | 3397719 | 21745850 ~ 21760630 (+) |
| AMCG00003853 | NA | other | downstream | 3542392 | 21890523 ~ 21901865 (+) |
| G3799 | med23 | other | downstream | 3574505 | 21922636 ~ 21923787 (+) |
