AMCG00003822 (map3k5)


Basic Information

Item Value
gene id AMCG00003822
gene name map3k5
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 19201663 ~ 19240595 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003822
ACATGTACAGGAAATTATACCTTTATACCGTATATGGTGACACCACACAATAAAGTGTATTGCTGTGAAAGTAGTTTAATGAAGGGACTTACTGAATTAATGCAGCCCAACTTCGAGATGTTGCTTGGGCCAATCTGCATGCCACTTGTGGATCGGTTTGTCCAGCTTTTGAAGTATTTCAGAGAAACGATCCTAAATGAGATCAGGAAAGCCCGGGAGCTGTACACCGGCATGGAGCTGGCAGCAGAGCTGGGCCGGATTCAACAGCGACTGGATAACGTTGAGTGCCTATCAGCTGATGTTGTCATCAACCTGCTTCTCTCCTACCGCGATATTCAGGATTACGATTCAGTTGTGAAGCTGGTTGAAACTCTGGAGAAGTTGCCAACATTTGATCCTGTGTCCCACCCCCATGTGAAGTTTCATTATGCTTTTGCACTGAATCGGAGAAACCTGCCTGGGGACAGACAGAAGGCTTTGGCAATAATGTTGCCACTGGTGCAGTCTGAGCAGCAGGTCGCCTCGGACATGTACTGCCTGGTGGGCCGAATCTACAAGGATACGTTTCTAGATTCTAActtcactgacacagagagcagagataGTGGTGCACAGTTTAAGAGGGGATTTGAATCAGAGCCAACACTACACTCAGGGATCAACTATGCAGTTCTTGTCCTGGCAGCAGGACACCAGTTTGACACATCCTTTGAACTTCGGAAAGTTGGTGTGAAGCTTAGTAGCCTCCTAGGTAAAAAAGGCAGCCTGGACAAGCTTCAGAGTTACTGGGATGTGGGATTCTTCCTGGGGGCCAGTATATTGGCCTGTGACAACCTGAGGGTGATCCAGGCCTCTGAGAAACTTTTCAAACTCAAGGCCCCTACTATACTGATATATCAGCATTTCAAAAAACCTTCTGGAGAGCAAGCTGCCCAAAAACAGGAACTAGTGGACTTTTGGATGGACTTTCTTGTGGAAGCCACAAAGAAGGAAGTCTCTTCAGTCCGTTTCCCAGTTTTGATATTAGAACCCACTAAAGTATACCAGCCTTCTTATCTGTCTATCAACAATGATGTTGAGGAGAAGACAGTGTCTATTTGGCATGTAGCTCCAGATGATAAGAAAGGGATTCACGAGTGGAACTTCACAGCTGCCTCCATCAGAGGTGTGAGcgTGTCCAAATTTGACGAGCGCAGTTCCTTTTTATATGTGCTACACAATGCTGAAGACTTTCAGATCTACTTCTGCACTGAACAACACTGTAAGAGGTTCTGTGAGTTGGTAAACAGCATAACACAGGAAGCCTTCAAGAGCCCAGATGAGTGGGAGTGTGAGACAGATGGGCTGGAGTATGACTATGAGTATGATGAGAATGGCGAGATGGTTGTGCTTGGGAAGGGGACTTTTGGAGTTGTATATGCAGGCAGAGACCTGAGTAACCAGGTTAGACTAGCCATCAAGGAGATTCCCGAGAGGGACAGTCGATACTCTCAGCCTCTTCACGAAGAGATTGCTCTTCATAAACATCTCAAGCACAAGAACATTGTCCAGTATCTTGGGTCCATCAGAAGTCTGTCTGCTCTGCTGAGATCAAAGTGGGGGCCTTTAAAGAACAATGAGCCGACAATAGGCTTTTATACCAAGCAGATTCTGGAAGGTTTAAAATATCTTCATGATAATCAGATTGCACACAGAGATATCAAgGGGGACAATGTACTGATAAACACATACAGTGGAGTCCTAAAAATATCAGATTTTGGTACTTCAAAAAGGCTTGCTGGGATCAACCCTTGCACAGAAACCTTTACAGgAACGCTGCAGTATATGGCACCTGAAATAATTGATAAGGGCCCGAGAGGTTATGGGAAGCCTGCTGATATCTGGTCCTTGGGCTGCACCATCATCGAAATGGCCACAGGAAAGCCGCCTTTCTATGAATTAGGGGAGCCACAGGCTGCCATGTTTAAGGTCGGTATGTTCAAAATCCATCCTGAGATTCCAGAGTCCATGTCTTTGGAGGCCAAGGCTTTCATCCTGCGCTGCTTTGAACCAGACCCAGACAAGCGAGCCACCGCCTTCGACCTCTTGACCGATGAGTTCCTCACTGTCACCAGCAGGAAGAAGAGGTCAAAGAACAACTTAACAGccCTTTCAACAGGATCAGAGTACTTGCGCAGTATCTCCCTGCCCGTGCCTGTGTTGGTGGAGGAcacaagcagcagcagtgagtACGGTTCTGTGTCTCCAGACAACGACCTCAGGACAGACCCCTTCATCTTCAAACCCAGGAACAAGTGCCTCAGCGAGAGGGACGTCAAAGGGACCCGGTCTTTATTCTTGAGCATTCCTGTTGAAAACTTTGAGGACCACAGTGCACCTCCGTCTCCTGAAGAAAAGGACACAGGGTTTTTCATGTTGAAGAAAGACAGTGAGAGGAGAGCCACATTACACAAGATCTTGACAGAGGACAAGGAGAAGGTAGTGAAAAACCTGGTGGAAGCCCTGGCACAGGGAACAGAAGAGACAAAGCTGAAAAGACAGCACATTTCCACGCTAGTGGTGAGCCTAGGGGACTTTGTAAGGACTGCAGATCGCAAGATCATTGCCAACACCCTGTCCCTGCTCAAGCTGGAGCTGGATTTTGACAGTTCGGCCATTAGCCAGCTGCAGGTAAATAAAGTGTTGCGAAACCATAACATCAAACCTCACTGGATGTTTGCCCTGGACAATATAATCCGCAAAGCTGTACAGACTGCCATTACCATTCTTGTCCCAGAACTAAGGCCACATTTCAGCCTGGCCTCGGAGAGCGACCCAGCCGACCAGGAGGACGCTGACGACGATGAGGATCCCGGAGACAACACTGCCAAGCAGTCCAGCCGGCAGCCCCCTGTCCGCCATGACGACACCGTGCCCACCTCGGGGGTCAGCACTCTCAGCTCCACGGTATCCCATGAGTCCCACAATGCCCAGCGCTCTGTCAGCATGGAGCTGGGGAGGATGAAATTAGAAACCaacagGTTGTTGGAGGAGCTGctagagaaggagaaggagtaCCAGATCATCCTTCATCAGGTcatagaggagagagagcaggagatcAAACTACTGAGACTGAAATCGGACCCAATAGATGTTCCTGCACCATCTGTTTGTCATCGATATACACACACTGCGGACCACGAGGACCCTGAGCTGACCAAATGGCTAAAAGATAATGATGCCGACGATGATACTATTGAAAGgTTTTTGGCAGAAGAGTACACACTGATGGACATCTTGCATTATGTGACGAGAGATGACCTAAAGagtttaaaattaagAGGGGGTATTCTGTGCAAACTGTGGAAAGCGATCACAGATTATCGAGAGAAACCCTCTTAATTGCTTTATAACCATACTTTCAATTGAGGAGGACTTCCATCAAAACTGAATCAGTATTCTCTTCACAACAcagcactttatttttaatattttttagacCAAAATGCTGACTCTTCTTATTCCTATGAACAATATTCTGTGGAGAAAAACGAATGTATAGATTTTTCAGATAAAAGAAATTGAAACCCCAGATGCCATTATTTCAAGATCTAGATGTTTTCAATTGTAGAGCACTGAGACTGAAACCACCCCCTGAGGTCAGCAGTCTGATGgtgactaaatatttatataacgATATACAAACCAATGGTTTTTATTACACCATCCTTTATACATCAATTATAGCAATCAATTACTTCTTATTCAATGTATATAAGCATACACATTTCTATAACTCTGAATTAttatgatatttacattttgtctttaGGGCTATTATcaatcatttacatttactggAACTAAGACTGAAAGTGTTTTTAGGACCACAAAGCTTGAAATTAGTTTTTGGTACAGATCTCAAGGTAAGACATTTTCAGTGCTATGTTTGAGGCTTGATTCTCCTTTTAGAACTTTTGGAAATACGAATATcttccattttattattcattagaTGAATTATGTACAAATTGCAAAAATGACAACATAAAGATTTTTTACCAAATTGATCTAAATTAGTTACTTTTTGGAATTTCTTcttacatgttttcatttccagTGTGTAGtcagtgttttgaaaaaaatatttgactgtTATTTTTCCATGGGAAtccacaattaattaattaattctgcagttcagtttttaaatattctacAATTAAGCTTGGTAACAAGGGCAGGATTGTGTcaaaaaatgtcagtttatataaatgcatttttacaattagttaaacaacaaaatgtggccAAGTTAgatcaataaaaaaatcaatagtaAAAATATGACTTActaaaaaatttaattaaatagattaaCTAAGTGACTCAGTACAATCTGTCTCAGTACTTTAGTGCATTACACTAAGAAAGCTTATTAGCACAACAGATAAAATGCAAAAGATTGCGTTATTACAAGAAAATATAGCATTATTTCACAGTAattattgcattaatgagaTATTATTCAGTTAATTTGCAATAATTATCATGTTAATATGAGATGatgttgcattattttgcaataataattgcattataCTTGCAGTCTTTCCTTGAATGGCAAATAGAATAGTTTCAGtttaataaactataataatatttttgaacACCCATGCAGTTTCAAAAGAACAAGGAAAGATTGCAGGTGTTCAGATTCAAGACTCGGCGCATGATCTTGTAAATACTCATATTGCAACTTTACATAACTGTTCCAGTCTCTAGAAAAGAGCTTAGAAGCTACATTTTCCCTGGAATTTTACATAGGTCCGGTTGTAAGCAATGACAGGGCCGGGGGACTTGGACACATAAGCATTCTCCACATAGCTTcccaaaacattaatatttgtatatccCAATATTCGTATTCCTCCATTTAAGTCTAAATCTAGATCTagttttcatttacaaatgcaGCTCTATATGTTTGTAAGCGACCTTGTTGAAGATGGTTTGAGATTTGATATTCAACTTCATGATGAACACAACACCagcactgcttttattttacattacccCTTCAATACTGCTAGGAATATTTGCCAAAGGGCCATTCAAAGTTTGCAAACTACAAGAAAGGTCCTACACTGCAGAATACCATGTcatttgttataaataataaactcacAAAGTTTTGATGTTTTGCTCACTCAAACCCTAGACCATAACCAATAAAGTAAGCAATCTTATAATTGTCTATATATCTATTATTCCCAACCAAATATCAAGACAAATAGCTGAGATTTCAAGTCCTGGTGTAATGGTTATGTGTAATAGAAAGTACAGTACAAAGTaacaaaattgttttaatacaagAATTATTGCAAGGTAATACAATATTATCtcaaattaacacaattaaactCACTGTGGCACTAATAACACTGCttataaagtaaaaacattaaatctgCACTCATTAGCTTAGTGACAAAGTCATTTCatagacaaaaaacaaaatatataaaactttagTATAATCTTTTTTTACTGGCTGACACTGGAGGCCCGTGTTGTTTTGAGCTCACACTCAGAATTCCAAAGCAAAATTTCATCTTTAAGTTGAATCCAAAATTAAAGGCTATTAAATTGCAGAATGCCAATAATAAAGTTAGTTAATGTATGATAAGTTAGATAACATACTGCACACCGGGTCTCCATGCAGGAATAAAACGAGCCCTGTGAACAGAGGCCCTTCACACATCATTCCCCACTGAATAAATCTGCCTCGAGAActtctatatttttattatgtgacAATGGAATAAAACTATGAGAACTAATGTTTATATAGCAtgtttacatatacataaatgtttgtgtgtgtgtgtttttatcaaGGTATTGTGCATATTCACAATTTAAAGTTTAGTTGGGCCATTGAAAATATACATGGgggaatacatttttgtattatgcaAATAGTGTGAGTTTTGCTATTTACTTCTTGGTatttactgtgtgtatatatatacagatatacatatacagctctggaaacaattaagagaccactgcaaaatgatcagtttctctggttttactatttataggtatgtgtttgggtaaaatgaacattgacaacatttctcccaaattcctaataaaaatatgaatggaatggaatggctgccatacatgtagagatggtGATTTAAg

Function

symbol description
map3k5 Predicted to enable MAP kinase kinase kinase activity. Acts upstream of or within defense response to bacterium. Human ortholog(s) of this gene implicated in Huntington's disease. Orthologous to human MAP3K5 (mitogen-activated protein kinase kinase kinase 5).

NR:

description
PREDICTED: mitogen-activated protein kinase kinase kinase 5

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04426 MAP3K5, ASK1; mitogen-activated protein kinase kinase kinase 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003822 True 6201 mRNA 0.40 27 19201663 19240595

Neighbor

gene id symbol gene type direction distance location
AMCG00003821 NA coding downstream 4987 19180679 ~ 19196676 (-)
AMCG00003818 lats1,LOC107742997 coding downstream 32012 19152616 ~ 19169651 (-)
AMCG00003820 katna1 coding downstream 51501 19142919 ~ 19150162 (-)
AMCG00003819 ppil4 coding downstream 69811 19119815 ~ 19131852 (-)
AMCG00003817 NA coding downstream 103351 19089198 ~ 19098312 (-)
AMCG00003823 ctgf,LOC106571301,LOC107683930,LOC107737382 coding upstream 43401 19283996 ~ 19287183 (-)
AMCG00003824 NA coding upstream 147770 19388365 ~ 19390719 (-)
AMCG00003829 NA coding upstream 234294 19474889 ~ 19478369 (-)
AMCG00003830 NA coding upstream 382014 19622609 ~ 19624841 (-)
AMCG00003831 NA coding upstream 436534 19677129 ~ 19677768 (-)
G3470 pcmt1,LOC107554157 non-coding downstream 21152 19175572 ~ 19180511 (-)
G3405 NA non-coding downstream 114971 19084704 ~ 19086692 (-)
G3403 NA non-coding downstream 121998 19079434 ~ 19079665 (-)
G3402 NA non-coding downstream 123799 19077456 ~ 19077864 (-)
G3395 NA non-coding downstream 155458 19045807 ~ 19046205 (-)
G3482 NA non-coding upstream 116050 19356645 ~ 19357239 (-)
G3535 NA non-coding upstream 472240 19712835 ~ 19713052 (-)
G3552 NA non-coding upstream 659374 19899969 ~ 19900381 (-)
G3553 NA non-coding upstream 661487 19902082 ~ 19903092 (-)
G3554 NA non-coding upstream 667435 19908030 ~ 19908341 (-)
AMCG00003782 ctsb other downstream 1049282 18146660 ~ 18152381 (-)
AMCG00003784 NA other downstream 1058982 18135379 ~ 18142681 (-)
G3181 NA other downstream 1256721 17942577 ~ 17944942 (-)
AMCG00003751 NA other downstream 2061281 17137248 ~ 17140382 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other downstream 2330188 16868332 ~ 16871475 (-)
AMCG00003825 NA other upstream 121223 19361818 ~ 19373225 (-)
G3517 LOC101154678 other upstream 184368 19424963 ~ 19425366 (-)
G3523 NA other upstream 203421 19444016 ~ 19506753 (-)
AMCG00003893 NA other upstream 4288924 23529519 ~ 23533882 (-)
AMCG00003896 tmem181 other upstream 4499990 23740585 ~ 23757796 (-)

Expression


Co-expression Network