AMCG00003831


Basic Information

Item Value
gene id AMCG00003831
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 19677129 ~ 19677768 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003831
ATGAATTTATCTTTCATTCAGATGGACTCAATAGAgtactgctttgaaaatgtcacCAAATCCTGCATTAAACTGTCTCGATCGGTTGGTGAAAGAGcagttatgtattttgtgtgtgttctagCAGTGCTAATCACAGTTGGTGGCAATCTGGTTCTTCATTCACCAAATAATCTGTTGGTTCTTTCTCTGGCAATTGTTGATTTCCTTCTTGGGATTTTTGCTCTTCCATTCAACATGATCAAAATGGTTGAAAATTGTTGGTATATGGGCTCATTCTTTTGCAAACTTATTGCATGTATtacaaatttgttttgcaatactTCAGTTTTTCACTTGTGTTTAATTGCTATTGATCGCTACTATGCAGTGTGTGAGCCTCTCcattatgcaaataaaatcacaagcaGAATAGCCTGGATTTCTATAACTCTTGTGTGGGTACTGGGTGCATTATATAGCTTTGGAGTGATTTTCACCAAATCCAATGACAAAAGTCTTGAGGGACTGGTTGCAATGTTATCATGTGTGGGTGCCTGCATTGTTCTAGTTAATAAGATGTGGCAATACATGGATGTACTAACTTTTTTGTTCCCTGTTTTGGCATGA

Function

GO: NA

KEGG:

id description
K05051 TAAR; trace amine associated receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003831 True 609 mRNA 0.37 2 19677129 19677768

Neighbor

gene id symbol gene type direction distance location
AMCG00003830 NA coding downstream 52288 19622609 ~ 19624841 (-)
AMCG00003829 NA coding downstream 198760 19474889 ~ 19478369 (-)
AMCG00003824 NA coding downstream 286410 19388365 ~ 19390719 (-)
AMCG00003823 ctgf,LOC106571301,LOC107683930,LOC107737382 coding downstream 389946 19283996 ~ 19287183 (-)
AMCG00003822 map3k5 coding downstream 436534 19201663 ~ 19240595 (-)
AMCG00003834 LOC101882414,LOC101885221,LOC107674786,LOC107572727 coding upstream 111625 19789393 ~ 19789825 (-)
AMCG00003837 NA coding upstream 399347 20077115 ~ 20078155 (-)
AMCG00003838 NA coding upstream 826331 20504099 ~ 20512976 (-)
AMCG00003840 NA coding upstream 1212364 20890132 ~ 20898701 (-)
AMCG00003842 LOC106607755,LOC106571353 coding upstream 1230622 20908390 ~ 20920636 (-)
G3482 NA non-coding downstream 319890 19356645 ~ 19357239 (-)
G3470 pcmt1,LOC107554157 non-coding downstream 496618 19175572 ~ 19180511 (-)
G3405 NA non-coding downstream 590437 19084704 ~ 19086692 (-)
G3403 NA non-coding downstream 597464 19079434 ~ 19079665 (-)
G3402 NA non-coding downstream 599265 19077456 ~ 19077864 (-)
G3535 NA non-coding upstream 35067 19712835 ~ 19713052 (-)
G3552 NA non-coding upstream 222201 19899969 ~ 19900381 (-)
G3553 NA non-coding upstream 224314 19902082 ~ 19903092 (-)
G3554 NA non-coding upstream 230262 19908030 ~ 19908341 (-)
G3584 NA non-coding upstream 351095 20028863 ~ 20416071 (-)
G3523 NA other downstream 170376 19444016 ~ 19506753 (-)
G3517 LOC101154678 other downstream 251763 19424963 ~ 19425366 (-)
AMCG00003825 NA other downstream 303904 19361818 ~ 19373225 (-)
AMCG00003782 ctsb other downstream 1524748 18146660 ~ 18152381 (-)
AMCG00003784 NA other downstream 1534448 18135379 ~ 18142681 (-)
AMCG00003893 NA other upstream 3851751 23529519 ~ 23533882 (-)
AMCG00003896 tmem181 other upstream 4062817 23740585 ~ 23757796 (-)
AMCG00003909 NA other upstream 4586139 24263907 ~ 24296246 (-)
G4521 fig4 other upstream 6220166 25897934 ~ 25901612 (-)
AMCG00003946 NA other upstream 6287652 25965420 ~ 25998628 (-)

Expression


Co-expression Network