AMCG00003836


Basic Information

Item Value
gene id AMCG00003836
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 20333123 ~ 20333536 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003836
ATGACCTTCTACTGCTCTCTTCTGGAGCGAGTTATGATGCCACAAGAATTCAACACATGGAGTGAAGTTATGGAATATGACCTGACAGAGGAGCATCATCTGCCGCTTGAGGTTGTGGACTTCGGGGTTGAGTTCTGCCTCGCCCTCTCTGAAGCCATAGTAATAGACCCAGAAATAGTTCAGGACATGAAATCCCACTGCAGAGACTACATGGTAGCTCTTATAAGAGAGATCAAGATGAGACTTCCTGATAACATCAAACAACTGGAGGCCCTAAAGTCTCTTTCCCCAAGCATTGTGCTCAGCTGCAAGAAGCCACATCTTGATGTTCTATCCTTCTTTCCTCTTTTCAAAGGAGATCCAGGAAAGGCTGACCAACAGTGGAGCATGATCCACACTCAAGACACTCCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003836 True 414 mRNA 0.46 1 20333123 20333536

Neighbor

gene id symbol gene type direction distance location
AMCG00003835 NA coding upstream 199768 20132773 ~ 20133355 (+)
AMCG00003833 NA coding upstream 388106 19944010 ~ 19945017 (+)
AMCG00003832 NA coding upstream 389286 19933174 ~ 19943837 (+)
AMCG00003827 NA coding upstream 701676 19630470 ~ 19631447 (+)
AMCG00003826 NA coding upstream 882850 19448872 ~ 19450273 (+)
AMCG00003844 lama2,LOC107653134 coding downstream 954924 21288460 ~ 21296218 (+)
AMCG00003843 lama2 coding downstream 980538 21314074 ~ 21333224 (+)
AMCG00003845 NA coding downstream 1014691 21348227 ~ 21438679 (+)
AMCG00003846 NA coding downstream 1106578 21440114 ~ 21447121 (+)
AMCG00003847 NA coding downstream 1158348 21491884 ~ 21535758 (+)
G3563 NA non-coding upstream 74100 20239654 ~ 20259023 (+)
G3562 NA non-coding upstream 92969 20094038 ~ 20240154 (+)
G3550 NA non-coding upstream 434580 19898266 ~ 19898543 (+)
G3549 NA non-coding upstream 435213 19897585 ~ 19897910 (+)
G3548 NA non-coding upstream 435588 19897110 ~ 19897535 (+)
G3582 NA non-coding downstream 57654 20391190 ~ 20419930 (+)
G3620 NA non-coding downstream 254555 20588091 ~ 20588564 (+)
G3635 NA non-coding downstream 443523 20777059 ~ 20801146 (+)
G3648 NA non-coding downstream 502201 20835737 ~ 20860294 (+)
G3661 NA non-coding downstream 570036 20903572 ~ 20908517 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other upstream 935437 19271965 ~ 19397686 (+)
G3108 NA other upstream 2180809 18146660 ~ 18152314 (+)
AMCG00003779 ctsb,catb,LOC107381178 other upstream 2190490 18131919 ~ 18142633 (+)
G3047 NA other upstream 2649135 17681817 ~ 17683988 (+)
AMCG00003744 NA other upstream 3290529 17032570 ~ 17042594 (+)
G3751 NA other downstream 1215665 21549201 ~ 21549533 (+)
G3771 NA other downstream 1412314 21745850 ~ 21760630 (+)
AMCG00003853 NA other downstream 1556987 21890523 ~ 21901865 (+)
G3799 med23 other downstream 1589100 21922636 ~ 21923787 (+)
AMCG00003874 NA other downstream 2349480 22683016 ~ 22769227 (+)

Expression


Co-expression Network