Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003837 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 20077115 ~ 20078155 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| id | description |
|---|---|
| K05051 | TAAR; trace amine associated receptor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003837 | True | 735 | mRNA | 0.38 | 2 | 20077115 | 20078155 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003834 | LOC101882414,LOC101885221,LOC107674786,LOC107572727 | coding | downstream | 287290 | 19789393 ~ 19789825 (-) |
| AMCG00003831 | NA | coding | downstream | 399347 | 19677129 ~ 19677768 (-) |
| AMCG00003830 | NA | coding | downstream | 452274 | 19622609 ~ 19624841 (-) |
| AMCG00003829 | NA | coding | downstream | 598746 | 19474889 ~ 19478369 (-) |
| AMCG00003824 | NA | coding | downstream | 686396 | 19388365 ~ 19390719 (-) |
| AMCG00003838 | NA | coding | upstream | 425944 | 20504099 ~ 20512976 (-) |
| AMCG00003840 | NA | coding | upstream | 811977 | 20890132 ~ 20898701 (-) |
| AMCG00003842 | LOC106607755,LOC106571353 | coding | upstream | 830235 | 20908390 ~ 20920636 (-) |
| AMCG00003841 | LOC108432850,LOC106607755 | coding | upstream | 872280 | 20950435 ~ 20959586 (-) |
| AMCG00003839 | LOC106607755 | coding | upstream | 951924 | 21030079 ~ 21042693 (-) |
| G3554 | NA | non-coding | downstream | 168774 | 19908030 ~ 19908341 (-) |
| G3553 | NA | non-coding | downstream | 174023 | 19902082 ~ 19903092 (-) |
| G3552 | NA | non-coding | downstream | 176734 | 19899969 ~ 19900381 (-) |
| G3535 | NA | non-coding | downstream | 364063 | 19712835 ~ 19713052 (-) |
| G3482 | NA | non-coding | downstream | 719876 | 19356645 ~ 19357239 (-) |
| G3587 | NA | non-coding | upstream | 160358 | 20238513 ~ 20239078 (-) |
| G3602 | NA | non-coding | upstream | 289850 | 20368005 ~ 20372943 (-) |
| G3607 | NA | non-coding | upstream | 313028 | 20391183 ~ 20419999 (-) |
| G3616 | LOC107575789 | non-coding | upstream | 497857 | 20576012 ~ 20576914 (-) |
| G3617 | NA | non-coding | upstream | 501209 | 20579364 ~ 20579571 (-) |
| G3523 | NA | other | downstream | 570362 | 19444016 ~ 19506753 (-) |
| G3517 | LOC101154678 | other | downstream | 651749 | 19424963 ~ 19425366 (-) |
| AMCG00003825 | NA | other | downstream | 703890 | 19361818 ~ 19373225 (-) |
| AMCG00003782 | ctsb | other | downstream | 1924734 | 18146660 ~ 18152381 (-) |
| AMCG00003784 | NA | other | downstream | 1934434 | 18135379 ~ 18142681 (-) |
| AMCG00003893 | NA | other | upstream | 3451364 | 23529519 ~ 23533882 (-) |
| AMCG00003896 | tmem181 | other | upstream | 3662430 | 23740585 ~ 23757796 (-) |
| AMCG00003909 | NA | other | upstream | 4185752 | 24263907 ~ 24296246 (-) |
| G4521 | fig4 | other | upstream | 5819779 | 25897934 ~ 25901612 (-) |
| AMCG00003946 | NA | other | upstream | 5887265 | 25965420 ~ 25998628 (-) |
