Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003839 |
| gene name | LOC106607755 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 21030079 ~ 21042693 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: receptor-type tyrosine-protein phosphatase kappa-like isoform X12 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003839 | True | 582 | mRNA | 0.49 | 3 | 21030079 | 21042693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003841 | LOC108432850,LOC106607755 | coding | downstream | 70493 | 20950435 ~ 20959586 (-) |
| AMCG00003842 | LOC106607755,LOC106571353 | coding | downstream | 109443 | 20908390 ~ 20920636 (-) |
| AMCG00003840 | NA | coding | downstream | 131378 | 20890132 ~ 20898701 (-) |
| AMCG00003838 | NA | coding | downstream | 517103 | 20504099 ~ 20512976 (-) |
| AMCG00003837 | NA | coding | downstream | 951924 | 20077115 ~ 20078155 (-) |
| AMCG00003848 | NA | coding | upstream | 193801 | 21236494 ~ 21238978 (-) |
| AMCG00003849 | NA | coding | upstream | 404862 | 21447555 ~ 21467681 (-) |
| AMCG00003850 | NA | coding | upstream | 436672 | 21479365 ~ 21480223 (-) |
| AMCG00003851 | epb41l2,LOC100380760 | coding | upstream | 715884 | 21758577 ~ 21766000 (-) |
| AMCG00003852 | epb41l2 | coding | upstream | 739899 | 21782592 ~ 21797499 (-) |
| G3695 | NA | non-coding | downstream | 76672 | 20905913 ~ 20953407 (-) |
| G3655 | NA | non-coding | downstream | 147935 | 20831370 ~ 20882144 (-) |
| G3646 | NA | non-coding | downstream | 198980 | 20830832 ~ 20831099 (-) |
| G3626 | NA | non-coding | downstream | 431094 | 20594932 ~ 20598985 (-) |
| G3618 | NA | non-coding | downstream | 443329 | 20586520 ~ 20586750 (-) |
| G3735 | NA | non-coding | upstream | 397433 | 21440126 ~ 21440361 (-) |
| G3736 | NA | non-coding | upstream | 401451 | 21444144 ~ 21444618 (-) |
| G3737 | NA | non-coding | upstream | 402075 | 21444768 ~ 21445218 (-) |
| G3739 | NA | non-coding | upstream | 403999 | 21446692 ~ 21447250 (-) |
| G3760 | NA | non-coding | upstream | 553156 | 21595849 ~ 21598381 (-) |
| G3523 | NA | other | downstream | 1523326 | 19444016 ~ 19506753 (-) |
| G3517 | LOC101154678 | other | downstream | 1604713 | 19424963 ~ 19425366 (-) |
| AMCG00003825 | NA | other | downstream | 1656854 | 19361818 ~ 19373225 (-) |
| AMCG00003782 | ctsb | other | downstream | 2877698 | 18146660 ~ 18152381 (-) |
| AMCG00003784 | NA | other | downstream | 2887398 | 18135379 ~ 18142681 (-) |
| AMCG00003893 | NA | other | upstream | 2486826 | 23529519 ~ 23533882 (-) |
| AMCG00003896 | tmem181 | other | upstream | 2697892 | 23740585 ~ 23757796 (-) |
| AMCG00003909 | NA | other | upstream | 3221214 | 24263907 ~ 24296246 (-) |
| G4521 | fig4 | other | upstream | 4855241 | 25897934 ~ 25901612 (-) |
| AMCG00003946 | NA | other | upstream | 4922727 | 25965420 ~ 25998628 (-) |
