AMCG00003883


Basic Information

Item Value
gene id AMCG00003883
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 23061960 ~ 23065930 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003883
ATGGCCCTAGATGGCGTGCATGTGAACCCCGCAGGCATTCGCTCAAGACAGGGCTCCTCCATCACTCAAGGCCCAGGCTTGTCCAACTCGGCCTACAACAGCACCCCTGCTACCGGGCTGCATGGCAAGATGAAGGAGCTACCAGGGATAAGTGATGAGGAGGATCTGTCAGTGAAGAAGACACAGCTGATTGAAAGTGAGTGCAGGAAGCTCTCTGTGCTCCAAGATGCCCAGAATGACCTGCAGAGGAGCATCTCTGTCAACTGGGCTCTGGGCGCAGAAGTGGAGTCGCTGGTGCAGGCTGTGTGCCGTCCCAAGGAGGTGGAAAAATTCCACACAGTTATTGGAGATCTGGACATGGTAGCCATTCTACTGTACTTATTGTCCAGCCGCTTGGTCCGGGTGGAGAGCGCTCTGGACAGCTTGAGCCCTGAGGCCAGCAAACCTGAGAGAATCGCTCTGACGGAGAAGAGAGAGCAGCTCCTGGGAAAGCTGGGTGAAGCTCGGGAGCTGAAGGAGCACATCGACCGGAGCGAGGAGGTGCTGCGTCAGGTGCTGGCACGGTGCCTCACTCCAGAGCAGCTGCAGGACTATTGCCACTTTGTGGCGACGAAGGTCGCACTTAGAGTGGAGCAGCGCCAACTGGAAGACAAGATCCGCCTGGGCGAGGAGCAGGTCATGtacctgagagagagcttggtCTATGGGCACTACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003883 True 717 mRNA 0.57 4 23061960 23065930

Neighbor

gene id symbol gene type direction distance location
AMCG00003879 sgk1 coding upstream 15728 23041823 ~ 23046232 (+)
AMCG00003877 LOC107571660 coding upstream 179099 22871505 ~ 22882861 (+)
AMCG00003878 hbs1l,LOC107756395 coding upstream 202155 22844343 ~ 22859805 (+)
AMCG00003876 NA coding upstream 232922 22823770 ~ 22829038 (+)
AMCG00003872 NA coding upstream 525667 22528359 ~ 22536293 (+)
AMCG00003882 NA coding downstream 7084 23073014 ~ 23081514 (+)
AMCG00003881 tcf21,LOC107701707,LOC107571274,LOC107756361,LOC107723756,LOC107671849,LOC105018007 coding downstream 69518 23135448 ~ 23137241 (+)
AMCG00003885 eya4 coding downstream 171416 23237346 ~ 23313877 (+)
AMCG00003889 NA coding downstream 308363 23374293 ~ 23389309 (+)
AMCG00003892 NA coding downstream 344405 23410335 ~ 23423173 (+)
G3991 NA non-coding upstream 192821 22868878 ~ 22869139 (+)
G3915 NA non-coding upstream 560131 22500917 ~ 22501829 (+)
G3914 NA non-coding upstream 561134 22500527 ~ 22500826 (+)
G3907 NA non-coding upstream 657106 22402604 ~ 22404854 (+)
G3886 NA non-coding upstream 821862 22236096 ~ 22240098 (+)
G4057 NA non-coding downstream 200340 23266270 ~ 23345005 (+)
G4059 NA non-coding downstream 249404 23315334 ~ 23322675 (+)
G4058 NA non-coding downstream 249698 23315628 ~ 23319122 (+)
G4071 NA non-coding downstream 296106 23362036 ~ 23362447 (+)
G4089 NA non-coding downstream 300261 23366191 ~ 23369996 (+)
AMCG00003874 NA other upstream 292733 22683016 ~ 22769227 (+)
G3799 med23 other upstream 1138173 21922636 ~ 21923787 (+)
AMCG00003853 NA other upstream 1160095 21890523 ~ 21901865 (+)
G3771 NA other upstream 1301330 21745850 ~ 21760630 (+)
G3751 NA other upstream 1512427 21549201 ~ 21549533 (+)
AMCG00003884 NA other downstream 266671 23332601 ~ 23338241 (+)
AMCG00003891 NA other downstream 455896 23521826 ~ 23533875 (+)
AMCG00003898 LOC105418227,LOC108432361,LOC107549029,LOC107708771,LOC107571650,LOC107756347,LOC107656533 other downstream 644099 23710029 ~ 23726144 (+)
AMCG00003902 NA other downstream 772659 23838589 ~ 24042885 (+)
AMCG00003910 zbtb2b other downstream 1052454 24118384 ~ 24129892 (+)

Expression


Co-expression Network