AMCG00003901


Basic Information

Item Value
gene id AMCG00003901
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 23847021 ~ 23852940 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003901
ATGAGGggagtTATGGCTGGAAATGTCACTGATCTCAACTATTTCGAAAATCTAGGACCTCATTTCCTTGATCATTTGATACTGGCCTTCTGCCTGTCCATGGTGGTAGGCCTGCTGATCGGTTCGTTGATCTGGATCCTAATCACGTGGCTGTCCAGGCGCAGGGCCTCAGCCCGCATCTCCACACGCAGCCCCCGGTCGCCCCGCGGCACCTCCTCACACAGCTTCCTGCATAACCGCTCTGGCTTCTACCGCAACAGCAGCTACGACCGGAGGAGCAATAACAGCCTGGCCAGCGCCGCCTTCACCTTCCATCGGCAGGCCTCCCTGGAGCAGCCCGACCCCTTGGGCCGTAAGCCCAGCTTCAGGGCGTCCACCTTCCACCCGCTGCTGCAGTGCAGTCAGATTGCCCGGGAAGCCGAGGAGGGCAGCCAGACCACCCTGCCCCGGAGCCCCGCCGGCTCCATCTCCAATGTGGCGACCCCGGCCAGGCCCGACTCCTTCTGGTCCAGCAGCAGCCTGCGTGCCTTCCACTCCACACAGACTCCCCCGCCCGCCTATGAGAGTGTCATTCGGGCCTTCCAGGAGACCTGCACTTGACCGGCTGGAGCTAAAAGAGAGACTAGATATTGAATGGTTTCCCACCTGGAATGATTCATTGAAAGCAGCTGTATATAGTGGACTGGAACTGTGATGGTTTAGAGATTAGTTAGTAGTCTAAGAATTTAACAGCTTTTATATGTTTCCATTGAAGGGTATGCCTTGAGGAGTTTGTATTTAGAATCTCATGTTTTAACTGATTCTAATTGTGTTGACATCACTTCTGGAACTGACAACATTTTCAGAGGCTGGACCTTTACTTATGCTTGATTGGCCTAACAATGGTGGCCAAGATCGTGCTCAGCACTACCAAATTGAAGGTTTTccagtgtgctctgtgtttgtaGGCCCAGTGACATAATCAATGACCCTGTAACACCATTTACTCAACATTACCCAACATTGCTAAGCTGTCAATGTTTGCCCCACTGCTTATTACCAGTTACAGTACAACTAGCGACCAATAAAACACCCCTGATCAGTCTCAGCTCTGCCAGGTTATGAGGACAGCGGCCAGACCCTCTAGGGGCTGTTCCAGACCCACTGCGGAAAACAAAGTCAAGGCAACTGGGAGAGGTTACAACATATCCTGTCCCCAGCTGGAAATACACAGAaagagtgactgtgactgtaaaGGAAAGAGAGGGATGTTATCAAGTTGTTCCATTATATAagtgttattttaattcaagAAATACCAGTGgtaaaagaaaagcagtttatctgtattgttttaaactgtaAGTGTGCCATTTAGTTTTCATTCAACAACACTACAGACTCTACTGGACCTGTCTACCGCAATGTCTGGATGTACGAATATGTCTTAGATTTtaactggaaaataattaattgttttgtgtgttatatacagttggaattaattttcaaaaatgggaaaatattatattgtggTATTATAG

Function

GO:

id name namespace
GO:0035162 embryonic hemopoiesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003901 True 1523 mRNA 0.48 3 23847021 23852940

Neighbor

gene id symbol gene type direction distance location
AMCG00003899 NA coding downstream 2003 23823777 ~ 23845018 (-)
AMCG00003900 tulp4 coding downstream 60258 23760602 ~ 23786763 (-)
AMCG00003895 NA coding downstream 193466 23642804 ~ 23653555 (-)
AMCG00003886 sh3bgrl2,LOC107549062,LOC107701732,LOC107671851,LOC107708803,LOC107571206 coding downstream 487181 23342244 ~ 23359840 (-)
AMCG00003887 NA coding downstream 513462 23322329 ~ 23333559 (-)
AMCG00003906 NA coding upstream 194214 24047154 ~ 24075283 (-)
AMCG00003904 NA coding upstream 229725 24082665 ~ 24097083 (-)
AMCG00003905 NA coding upstream 246072 24099012 ~ 24103121 (-)
AMCG00003907 NA coding upstream 293003 24145943 ~ 24191342 (-)
AMCG00003908 NA coding upstream 370445 24223385 ~ 24278980 (-)
G4174 gtf2h5,tf2h5,LOC107659223,LOC107721375 non-coding downstream 24323 23820690 ~ 23822698 (-)
G4130 NA non-coding downstream 292497 23554276 ~ 23554524 (-)
G4101 NA non-coding downstream 423548 23399861 ~ 23423473 (-)
G4039 NA non-coding downstream 731336 23045315 ~ 23115685 (-)
G4000 NA non-coding downstream 990616 22856026 ~ 22856405 (-)
G4222 NA non-coding upstream 190728 24043668 ~ 24046142 (-)
G4255 NA non-coding upstream 271911 24124851 ~ 24125052 (-)
G4256 NA non-coding upstream 275601 24128541 ~ 24129966 (-)
G4353 NA non-coding upstream 782350 24635290 ~ 24635495 (-)
G4390 NA non-coding upstream 967901 24820841 ~ 24881609 (-)
AMCG00003896 tmem181 other downstream 89225 23740585 ~ 23757796 (-)
AMCG00003893 NA other downstream 313139 23529519 ~ 23533882 (-)
G3523 NA other downstream 4340268 19444016 ~ 19506753 (-)
G3517 LOC101154678 other downstream 4421655 19424963 ~ 19425366 (-)
AMCG00003825 NA other downstream 4473796 19361818 ~ 19373225 (-)
AMCG00003909 NA other upstream 410967 24263907 ~ 24296246 (-)
G4521 fig4 other upstream 2044994 25897934 ~ 25901612 (-)
AMCG00003946 NA other upstream 2112480 25965420 ~ 25998628 (-)
AMCG00003967 LOC107095448 other upstream 2977414 26830354 ~ 26869578 (-)
AMCG00004006 NA other upstream 5471801 29324741 ~ 29329115 (-)

Expression


Co-expression Network