AMCG00003905


Basic Information

Item Value
gene id AMCG00003905
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 24099012 ~ 24103121 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003905
ATGGCCGCTCAAGCCGGGCTGCAGGGGTTTCCGGAGCCGCTTTCAGCGAAGTACACGGGatcatttgcattttttacagTAAAAGACAGATTGCCAACAATACTGACCAAGGTTATTGACACCATCCATcggaataaaaatgcattttttaagcAGCACGGGGAGGAAGGAATCAAGGCAGAAAAGGGTGCGATCGCAATTCTGTCTAAGCTGAGGAATGAGCTGCAGACAGACAAGCCTGTCCTGCCTTTGACCGATGGCAGGGTGGACATGGACATGTGGAACCAGTACATGCAGAGACAGCAGGCCCTGCTGGGAGACAGTGAGCCCCCAAGCTGGTTTAAGTCATCCTGGCTTTATGTGGAGTGCTATATGTACCGGAGGATCCAGGAAGCTATTCATCTAAATCCTCCGATTTCTGACTATGATGCTTTTAGAGATGGAAAGGTTCAAAGCTTCTTTGAGTCTCAGCAAGCTATAATGGCGATTTGCACATATCTGTGTGGCGTGCATAAAAATATAGATGATCTGTCGGAAGAGCAGCTGTTGGAGCACTTCATCAAACTACTGCAAGTATCCCTTTGGGGAAACAAGTGTGACCTCTCCATTTCAGCTGGGCAGGAGAACTCCCAGAAGTCCAGTCCACTTGATTCCCTGGGAGCTTTGAAACCTTTTATCTTGGTAGATGACACCAGCATGGTCTGGCCTGTCTTGATGAACAGCAGAGTGGCAGCAGGGCCTGTGCAGTCGGCAGCCAGAGTGGTCTATGTCTTGGACAATGCTGGCTTTGAGCTCATCACTGATCTGGTTCTGGCTGATTACTTGGTGGCCTCCAAGCTTGCCAGTGAAATCCACTTCCATGGAAAGAGCTTACCGTGGTTTGTGTCTGACACAACTAGGAAGGATTTTGACTGGACAATAAAGCAAACCCTAGCTGCCAATCACATGTGGATGTCCAAGTGCGGTGTTCGATGGAAAAGTTACTTGAAAGATGGCACTTGGTCTTACCACGATCACCCTTTCTGGACTCTTCCTCATGAATTCTGTGACATGGCTGCTGATGCTCCTGATCTGTACGCCGAACTGCAGAAGGCTGACTTGATCATTTTCAAGGGGGATCTCAACTACAGGAAATTAACGAGCGACAGAAAATGGGACCATACAGTGTCTTTCAAAAAGGCTTTGAGAGGCTTCCACCCGGCTCCTTTGTGTAGCCTGAGAACATTAAAAGCTGATGTGCAGGTTGGGCTGCAGGCTGGTCAGGGGGAGACCCTGATTGCCGCAGATCCAAATTGGATGACTAGTGGCAAATATGCAGTGATTCAGTTCTGCAGTGCGCTACAGAATGATTGA

Function

GO: NA

KEGG:

id description
K23114 ARMT1; damage-control phosphatase, subfamily III

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003905 True 1353 mRNA 0.48 5 24099012 24103121

Neighbor

gene id symbol gene type direction distance location
AMCG00003904 NA coding downstream 1929 24082665 ~ 24097083 (-)
AMCG00003906 NA coding downstream 23729 24047154 ~ 24075283 (-)
AMCG00003901 NA coding downstream 246072 23847021 ~ 23852940 (-)
AMCG00003899 NA coding downstream 253994 23823777 ~ 23845018 (-)
AMCG00003900 tulp4 coding downstream 312249 23760602 ~ 23786763 (-)
AMCG00003907 NA coding upstream 42822 24145943 ~ 24191342 (-)
AMCG00003908 NA coding upstream 120264 24223385 ~ 24278980 (-)
AMCG00003916 NA coding upstream 553356 24656477 ~ 24683766 (-)
AMCG00003919 fbxo30,LOC108239090,LOC103144688,LOC102226384 coding upstream 584092 24687213 ~ 24695742 (-)
AMCG00003921 LOC105418861 coding upstream 593950 24697071 ~ 24708960 (-)
G4222 NA non-coding downstream 52870 24043668 ~ 24046142 (-)
G4174 gtf2h5,tf2h5,LOC107659223,LOC107721375 non-coding downstream 276314 23820690 ~ 23822698 (-)
G4130 NA non-coding downstream 544488 23554276 ~ 23554524 (-)
G4101 NA non-coding downstream 675539 23399861 ~ 23423473 (-)
G4039 NA non-coding downstream 983327 23045315 ~ 23115685 (-)
G4255 NA non-coding upstream 21730 24124851 ~ 24125052 (-)
G4256 NA non-coding upstream 25420 24128541 ~ 24129966 (-)
G4353 NA non-coding upstream 532169 24635290 ~ 24635495 (-)
G4390 NA non-coding upstream 717720 24820841 ~ 24881609 (-)
G4397 NA non-coding upstream 765590 24868711 ~ 24873886 (-)
AMCG00003896 tmem181 other downstream 341216 23740585 ~ 23757796 (-)
AMCG00003893 NA other downstream 565130 23529519 ~ 23533882 (-)
G3523 NA other downstream 4592259 19444016 ~ 19506753 (-)
G3517 LOC101154678 other downstream 4673646 19424963 ~ 19425366 (-)
AMCG00003825 NA other downstream 4725787 19361818 ~ 19373225 (-)
AMCG00003909 NA other upstream 160786 24263907 ~ 24296246 (-)
G4521 fig4 other upstream 1794813 25897934 ~ 25901612 (-)
AMCG00003946 NA other upstream 1862299 25965420 ~ 25998628 (-)
AMCG00003967 LOC107095448 other upstream 2727233 26830354 ~ 26869578 (-)
AMCG00004006 NA other upstream 5221620 29324741 ~ 29329115 (-)

Expression


Co-expression Network