AMCG00003942 (LOC101067178)


Basic Information

Item Value
gene id AMCG00003942
gene name LOC101067178
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 25811320 ~ 25818975 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003942
ATGAATGGGAGCCTGGTGGCAAATGAGACGGCAGCTCCATCCCCGTGGGTCGGCGCCGTGGATGACAACAGCACCCTGCAGCTTTCCTCTGAGCCGCCGGACTTCGCCATTAACCCGTGGGACATCATGCTGTGCATCTCCGGGACTGTGATCGCCTGCGAGAATGCCATTGTTGTGGCCATTATTTTCTACACGCCGTCCTTAAGGACACCCATGTTCGTCCTCATCGGGAGCCTTGCAACTGCCGATCTCTTGGCCGGAATGGGATTAATATTGAACTTTGTATTCCAATATTTAATTCCCTCTGAGACTATCAGCCTCATCACATCGCATTATGTGGCCACCAAGAAAGGCGTCTCGACTCTCGCCATCATCTTGGGCACATTTGGGGCGAGCTGGCTGCCCTTTGCCATCTACTGCCTACTGACCTGTGAGGAGGCAGGAGAAGGAATTGTGAGCGAGGTGGTGCTGATGGACTGTGGAAGAGCAAGTGCCAaccagcaggagagagaggtgaCCCTGGATGCTGTCTGGTCTGTGGTCGACCTGTGGAAGCAACAGAGAGGGGAGCTACAGGGCGATGGGTCTAGCCACTGA

Function

NR:

description
PREDICTED: G-protein coupled receptor 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003942 True 597 mRNA 0.55 3 25811320 25818975

Neighbor

gene id symbol gene type direction distance location
AMCG00003929 cdc40 coding downstream 114781 25660330 ~ 25696539 (-)
AMCG00003928 NA coding downstream 219833 25580771 ~ 25591487 (-)
AMCG00003927 NA coding downstream 252972 25553538 ~ 25558348 (-)
AMCG00003920 NA coding downstream 1067130 24713229 ~ 24744190 (-)
AMCG00003921 LOC105418861 coding downstream 1102360 24697071 ~ 24708960 (-)
AMCG00003940 fig4 coding upstream 29186 25848161 ~ 25851389 (-)
AMCG00003941 fig4 coding upstream 55172 25874147 ~ 25884138 (-)
AMCG00003945 NA coding upstream 187875 26006850 ~ 26015600 (-)
AMCG00003952 NA coding upstream 267772 26086747 ~ 26117524 (-)
AMCG00003951 NA coding upstream 336568 26155543 ~ 26214675 (-)
G4455 NA non-coding downstream 343887 25466252 ~ 25467433 (-)
G4415 NA non-coding downstream 743078 25063554 ~ 25068242 (-)
G4390 NA non-coding downstream 929711 24820841 ~ 24881609 (-)
G4397 NA non-coding downstream 937434 24868711 ~ 24873886 (-)
G4353 NA non-coding downstream 1175825 24635290 ~ 24635495 (-)
G4602 NA non-coding upstream 458469 26277444 ~ 26279767 (-)
G4624 sec63,LOC106940628 non-coding upstream 540882 26359857 ~ 26365069 (-)
G4660 NA non-coding upstream 714905 26533880 ~ 26586892 (-)
G4665 NA non-coding upstream 739894 26558869 ~ 26561251 (-)
G4727 NA non-coding upstream 939376 26758351 ~ 26758880 (-)
AMCG00003909 NA other downstream 1515074 24263907 ~ 24296246 (-)
AMCG00003896 tmem181 other downstream 2053524 23740585 ~ 23757796 (-)
AMCG00003893 NA other downstream 2277438 23529519 ~ 23533882 (-)
G3523 NA other downstream 6304567 19444016 ~ 19506753 (-)
G3517 LOC101154678 other downstream 6385954 19424963 ~ 19425366 (-)
G4521 fig4 other upstream 78959 25897934 ~ 25901612 (-)
AMCG00003946 NA other upstream 146445 25965420 ~ 25998628 (-)
AMCG00003967 LOC107095448 other upstream 1011379 26830354 ~ 26869578 (-)
AMCG00004006 NA other upstream 3505766 29324741 ~ 29329115 (-)
AMCG00004038 LOC105015767 other upstream 4365643 30184618 ~ 30220135 (-)

Expression


Co-expression Network