Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003971 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 26878702 ~ 26879865 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0001756 | somitogenesis | biological_process |
| GO:0009880 | embryonic pattern specification | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003971 | True | 330 | mRNA | 0.41 | 4 | 26878702 | 26879865 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003969 | NA | coding | upstream | 124287 | 26721890 ~ 26754415 (+) |
| AMCG00003964 | NA | coding | upstream | 228311 | 26634477 ~ 26650391 (+) |
| AMCG00003963 | NA | coding | upstream | 300498 | 26567730 ~ 26578204 (+) |
| AMCG00003959 | NA | coding | upstream | 317581 | 26532149 ~ 26561121 (+) |
| AMCG00003957 | scml4 | coding | upstream | 454579 | 26395626 ~ 26424123 (+) |
| AMCG00003977 | grik2,LOC101466412,LOC102291713,LOC102207761,LOC107740554 | coding | downstream | 500694 | 27380559 ~ 27382002 (+) |
| AMCG00003972 | grik2,LOC107667969 | coding | downstream | 550225 | 27430090 ~ 27449894 (+) |
| AMCG00003973 | grik2,LOC103365520,LOC107103501,LOC105917636 | coding | downstream | 612641 | 27492506 ~ 27506149 (+) |
| AMCG00003980 | NA | coding | downstream | 1182690 | 28062555 ~ 28094602 (+) |
| AMCG00003982 | NA | coding | downstream | 1218195 | 28098060 ~ 28098326 (+) |
| G4694 | NA | non-coding | upstream | 227135 | 26651285 ~ 26651567 (+) |
| G4595 | NA | non-coding | upstream | 621677 | 26256781 ~ 26257025 (+) |
| G4594 | NA | non-coding | upstream | 622596 | 26255789 ~ 26256106 (+) |
| G4593 | NA | non-coding | upstream | 634065 | 26244247 ~ 26244637 (+) |
| G4592 | NA | non-coding | upstream | 634648 | 26243662 ~ 26244054 (+) |
| G4787 | NA | non-coding | downstream | 402139 | 27282004 ~ 27282241 (+) |
| G4804 | NA | non-coding | downstream | 703706 | 27583571 ~ 27584034 (+) |
| G4806 | NA | non-coding | downstream | 841595 | 27721460 ~ 27776442 (+) |
| G4808 | NA | non-coding | downstream | 897425 | 27777290 ~ 27777659 (+) |
| G4837 | NA | non-coding | downstream | 1224345 | 28104210 ~ 28105707 (+) |
| AMCG00003962 | NA | other | upstream | 291810 | 26582667 ~ 26586892 (+) |
| AMCG00003948 | sesn1,LOC102782344 | other | upstream | 793580 | 26081283 ~ 26085122 (+) |
| AMCG00003930 | wasf1,LOC107661360,LOC107556997,LOC107739187,LOC107564591,LOC107667835 | other | upstream | 1082907 | 25785173 ~ 25795795 (+) |
| G4360 | NA | other | upstream | 2194782 | 24683400 ~ 24683920 (+) |
| AMCG00003910 | zbtb2b | other | upstream | 2748810 | 24118384 ~ 24129892 (+) |
| G4831 | NA | other | downstream | 1182498 | 28062363 ~ 28103211 (+) |
| AMCG00003988 | NA | other | downstream | 1499946 | 28379811 ~ 28399741 (+) |
| AMCG00003990 | NA | other | downstream | 1574554 | 28454419 ~ 28465646 (+) |
| AMCG00003991 | NA | other | downstream | 1688319 | 28568184 ~ 28585674 (+) |
| AMCG00003993 | NA | other | downstream | 1760309 | 28640174 ~ 28683981 (+) |
