AMCG00003982


Basic Information

Item Value
gene id AMCG00003982
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 28098060 ~ 28098326 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003982
ATGGTGGCCCACTGTCCTCACAAGACTCTCACGCAGCAGCAGCCCGCCAGCGCTCAGGGAAGATACGAAGCCGAACCGCAGCCTTCTACCTCTGCTTTCCAGAGAGAAGGAGCCTACTCAACACCACCCTACTCTCAGGAGGGAAGAGCGGAGGTGCCGGAGAGACCGGGCCGCTCCCCCCAGGAAGCTTCCTCAAGTAAGTCTTCTGCGTCCCCGGAAGATCCCAGTCGGAAAGGACCATCTgtccaaaaaaggaaaaagacctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003982 True 267 mRNA 0.58 1 28098060 28098326

Neighbor

gene id symbol gene type direction distance location
AMCG00003980 NA coding upstream 3458 28062555 ~ 28094602 (+)
AMCG00003973 grik2,LOC103365520,LOC107103501,LOC105917636 coding upstream 591911 27492506 ~ 27506149 (+)
AMCG00003972 grik2,LOC107667969 coding upstream 648166 27430090 ~ 27449894 (+)
AMCG00003977 grik2,LOC101466412,LOC102291713,LOC102207761,LOC107740554 coding upstream 716058 27380559 ~ 27382002 (+)
AMCG00003971 NA coding upstream 1218195 26878702 ~ 26879865 (+)
AMCG00003983 NA coding downstream 161370 28259696 ~ 28275388 (+)
AMCG00003985 NA coding downstream 256189 28354515 ~ 28369974 (+)
AMCG00003989 NA coding downstream 274820 28373146 ~ 28379173 (+)
AMCG00003992 rnf146,LOC107735261 coding downstream 489505 28587831 ~ 28591593 (+)
AMCG00003994 NA coding downstream 591562 28689888 ~ 28698767 (+)
G4808 NA non-coding upstream 320401 27777290 ~ 27777659 (+)
G4806 NA non-coding upstream 321618 27721460 ~ 27776442 (+)
G4804 NA non-coding upstream 514026 27583571 ~ 27584034 (+)
G4787 NA non-coding upstream 815819 27282004 ~ 27282241 (+)
G4694 NA non-coding upstream 1446493 26651285 ~ 26651567 (+)
G4837 NA non-coding downstream 5884 28104210 ~ 28105707 (+)
G4917 NA non-coding downstream 368591 28466917 ~ 28468944 (+)
G4981 NA non-coding downstream 794358 28892684 ~ 28893031 (+)
G5005 NA non-coding downstream 854227 28952553 ~ 28953065 (+)
G5085 NA non-coding downstream 1256195 29354521 ~ 29361679 (+)
AMCG00003962 NA other upstream 1511168 26582667 ~ 26586892 (+)
AMCG00003948 sesn1,LOC102782344 other upstream 2012938 26081283 ~ 26085122 (+)
AMCG00003930 wasf1,LOC107661360,LOC107556997,LOC107739187,LOC107564591,LOC107667835 other upstream 2302265 25785173 ~ 25795795 (+)
G4360 NA other upstream 3414140 24683400 ~ 24683920 (+)
AMCG00003910 zbtb2b other upstream 3968168 24118384 ~ 24129892 (+)
AMCG00003988 NA other downstream 281485 28379811 ~ 28399741 (+)
AMCG00003990 NA other downstream 356093 28454419 ~ 28465646 (+)
AMCG00003991 NA other downstream 469858 28568184 ~ 28585674 (+)
AMCG00003993 NA other downstream 541848 28640174 ~ 28683981 (+)
AMCG00004011 ccnc other downstream 1429088 29527414 ~ 29541358 (+)

Expression


Co-expression Network