AMCG00004005


Basic Information

Item Value
gene id AMCG00004005
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 29190680 ~ 29197175 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004005
GAGGGAAGAAACTTGAAGCTTTTGGGGGTTTTTGCAAAAGCATCAAGTGCAGTCGGTGCAGAGGGAGTGGGGCTGCTGCGGCTGTCTGCTCCTGACAAGACGAGTCCTGGAGAGAAGTTTCTGTCTCAGGAGGGGAAGCACCATTTATTACTAACATCGACAGCATTTACAGGAGTTTGTGATATCAGAGCAAGAAACAACTTTGCAATGGGCTTCATACCACTGTTCCTTCTGCTTTCTTTAACTGCATTAGGAGCAGCCTCGGGGGAAGAGGCTGAGGATGAGTATACCTGGCACTTAAGAAAAGTACCACTAGTGTTGAATAAGAGAACTGTTATCCTTAGTAGCCCAGAGTTTAAGGCTGAAGCCAAACCACAGTTAAATGTAACCTGTGGGATTGAATGCCAAAGCCAGTTACCACTGCCAAGTGTGTCTGACCTTGAGAACTTCCTTTCATATGAGACCGTTTATGAGAATGGCACTCGTACCTCGACAGAAGTCTATTTCAGGGACTTTGATGTGCAGACTGAGCATGCTGTTATTATGGACTCACATACACGGAGGAAAAGGGAAGTCTATGGCACGGACAGTCGATTTACCATCGCAGACAAGCAGTTTGTGACCAATTACCCTTTCTCTACTTCTGTCAAAGTATCCACAGGCTGCACAGGCATCCTCGTGTCCCCAAAGCATGTTCTCACAGCAGCCCACTGCATCCACGATGGAAAAGATTACATCAAAGGCGTCAAGAAGCTTAGAGTCGGGATACTGAAACTGAGGTCAAAGCGTGGgggcaaaaagaggaaaggATCCAAAAAAAGGAACCGGAGGAGTTTGGAAATTAAACCATCTTTCCAGTGGACGAGAGTCAAGCGTACTCAGGTGCCAAAGGGCTGGTTCAAAGGCGTGTCCGAGGATGTGGCAGTGGATTACGACTATGCTATACTGGAACTAAAGCGGCCACAAAAGCAGAAGTTCATGGAAATTGGCATCATTCCCTCGGTGAAGAAAGTCCCAGGCAGTCGGATACACTTCTCTGGCTTTGACGATGACAGGCCTGGGCAGCTGGTTTACCGTTTCTGCAGTGTCTCTGACGAGTCCAACGACCTGCTGTATCAGTACTGCGATGCCCAGCCTGGGTCCAGTGGCTCTGGCGTGTACATCCGCCTGAAGGAACCTGGAAAGAAGAAGTGGAAAAGAAAGATCATTGGGGTCTTTTCTGGTCATCAGTGGGTGGATGTAAATGGCGTTCAACAGGATTACAATGTGGCTGTCAGAATAACCCCTCTCAAGTACGCGCAGATCTGCTTTTGGGTGCACGGGAACTATGCAGACTGCCGAGATGGTTGATGAACACCTAAAATGACTTAACCGGCACctattatactgtatatgaaaTCCTGTACTGAACAGTGAACAGTGATTGCccttctaaaaaacaaa

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004005 True 1443 mRNA 0.48 2 29190680 29197175

Neighbor

gene id symbol gene type direction distance location
AMCG00004004 LOC100304755 coding downstream 71975 29108945 ~ 29118705 (-)
AMCG00004001 NA coding downstream 109088 29046131 ~ 29081592 (-)
AMCG00004000 LOC104961995 coding downstream 188176 28979027 ~ 29002504 (-)
AMCG00004002 fam46a,fam46aa,LOC100698511,LOC107378903 coding downstream 232382 28956293 ~ 28958298 (-)
AMCG00003995 elovl4,LOC108434897,LOC105908900,LOC103388604 coding downstream 475089 28699380 ~ 28715591 (-)
AMCG00004018 prdm13,LOC106583971,LOC106605027 coding upstream 303670 29500845 ~ 29506998 (-)
AMCG00004021 NA coding upstream 315835 29513010 ~ 29526510 (-)
AMCG00004019 NA coding upstream 341817 29538992 ~ 29546101 (-)
AMCG00004020 pou3f2,LOC106584047,LOC106605033 coding upstream 500865 29698040 ~ 29699320 (-)
AMCG00004022 LOC106581764 coding upstream 513802 29710977 ~ 29880791 (-)
G5032 NA non-coding downstream 179871 29007691 ~ 29010809 (-)
G5012 NA non-coding downstream 215413 28974978 ~ 28975267 (-)
G4982 NA non-coding downstream 297648 28892682 ~ 28893032 (-)
G4966 NA non-coding downstream 491656 28698475 ~ 28699024 (-)
G4923 NA non-coding downstream 718911 28471562 ~ 28471769 (-)
G5181 NA non-coding upstream 905270 30102445 ~ 30102654 (-)
G5194 NA non-coding upstream 915208 30112383 ~ 30115011 (-)
G5269 NA non-coding upstream 1340761 30537936 ~ 30538437 (-)
G5273 NA non-coding upstream 1355802 30552977 ~ 30553218 (-)
G5315 NA non-coding upstream 1545604 30742779 ~ 30743167 (-)
AMCG00003967 LOC107095448 other downstream 2321102 26830354 ~ 26869578 (-)
AMCG00003946 NA other downstream 3192052 25965420 ~ 25998628 (-)
G4521 fig4 other downstream 3289068 25897934 ~ 25901612 (-)
AMCG00003909 NA other downstream 4894434 24263907 ~ 24296246 (-)
AMCG00003896 tmem181 other downstream 5432884 23740585 ~ 23757796 (-)
AMCG00004006 NA other upstream 127566 29324741 ~ 29329115 (-)
AMCG00004038 LOC105015767 other upstream 987443 30184618 ~ 30220135 (-)
AMCG00004041 NA other upstream 1076631 30273806 ~ 30276227 (-)
AMCG00004052 NA other upstream 1616606 30813781 ~ 30894824 (-)
AMCG00004060 NA other upstream 1772504 30969679 ~ 30973496 (-)

Expression


Co-expression Network