AMCG00004012


Basic Information

Item Value
gene id AMCG00004012
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 29613189 ~ 29626518 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004012
cgcgcaggcctgcgcacatctgcgctacacgagcGCGCCCACTGTTCTCCGTGTGGTGTGGACAGAATCAGTAACAGTCAATGACATCACCGTGTGCACGGCCATAGACAAAAGCCCGGAGCAGCTGCGCAAGGATGCTGTCCCCGCTGCAGAGACGAGGATCAAGCAAGATGTTGTCTTTTCGCATTTTCCAACTGAAATTACCCATCTTCGACCATTAAGACTCATGCAATCATCTTAATGAAGCCTAAAAAACCTAGTGCCGAGGAAGCAGGTGGCGAATCTGACAAAGCATGTACTGGGGTGTTGGTTTCGCCTCGTCCCGGTCTTGTGTGGTTGATCTGAGCAGGAATCAAAGCTTCTCCTTCGGACTGTGTGGCTCCGATGATCACTACTCGTTTTATGGGTACATCGTCACTTTCCCTCTGCAGGACTACAGCGGGATCATGTCGGGGCTGGGGTCAGATTCCTGGTGGAAGAAAACCCTGTATTTGACCGGGGGAGCCCTGCTCGCCGCTGCTGCCTACCTTCTCCATGAGCTGCTGGCAATCAGAAAGGAACAAGAAGTTGATTCAAAAGATGCAATTATTCTTCATCAATTCTCAAGGCCAAAGAATGGAGTTCCTAGTTTGTCACCATTTTGCTTAAAGATGGAAACATACCTTAGAATGGTGGATTTACCCTATCAGaATTATTTTGATGGAAAACTTTCTCCCCAAGGAAAGATGCCTTGGATTGAATACAACCACGAGAAAGTCTCAGGCACTGAGTTCATCATAGATTTCTTAGAGGATAAACTGGGAGTAAATTTAAATAAGAACTTGAACCCTCATGAAAAGGGAGTATCTAGAGCTGTGACTAAAATGGTTGAAGAGCACTTTTATTGGACCATTGCTTATTGTCAGTGGGTGGACAATCTGCAGGAGACCCAGAAGATGCTGTCTGTCACCGGGCCTCTCAGCGACCTCCTCAAGTGGATCCTCAGCCACCTGACCCGAGGCATCGTCAAGAGAGAGATGTACGGCCACGGCATCGGCCGCTTCTCCAAGGAGGAGATCTATGCGCTCATGGAGAAGGACATGCGAACACTAGCAACTATTTTAGGtgataagaaatatataatgggACCAAAACTTTCATCAGTAGATGCTACAGTGTTTGGACATCTAGCTCAAGCAATGTGGACACTACCTGGAACAAGGCCTGAGCAACTGATTAAGGGTGAGTTAATAAACCTAGCCATGTACTGTGAGAGAATAAGAAGAAAGTTCTGGCCTGAGTGGTGTGACGATTTTGACTTCATGTACGACGAGACCAGTGAGGAAAGCCTGACGCCGACGCAGCTCCACGAGTACGGCTTGTATTCACGGACTGAAACGTTCGAAGAGGAAGTGACAGAAAACAGCTTCTCCTGCTCCCACACGCCAGACACGGACTACACCGGCCACTCGCTCTTTGACTCTGACGTAGAAATGGAAGAGTTCACAGATCAGGAGCAGTTCAAATGTTAGTCCCTTAAACCCCGCAAGTAAGTAATCATATGTAGGCCCTCACACACACCTGCCTCTCCAGAATGAGCGCAGGAATACGTTGAAGAAATAAAGGCATGTCTGTCATAGTGAGACGCAGATAGGCAGAATACATTGATTAGCAGGTAGGATTGCAGGAAGCACACGGATGGAGCTCGGGAGTCCAGCTGGAGCATTTATCTCTCTTCTAAAAATCAGAAGACATGATCAACGAAGAACAACTGCTTGTGGGTAACTTTTAAACGtgtttcattaattcatttataatgTTAAGCATTATAAAAGGACCAATGACTTTCATTAGGATATCAGTGGTAAAGACATCTGACTTTTTTCACTGtggtatgtattttttttttttttcaggtgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004012 True 1900 mRNA 0.46 6 29613189 29626518

Neighbor

gene id symbol gene type direction distance location
AMCG00004015 NA coding upstream 1659 29600561 ~ 29611530 (+)
AMCG00004017 NA coding upstream 14962 29591603 ~ 29598227 (+)
AMCG00004014 NA coding upstream 26038 29581102 ~ 29587151 (+)
AMCG00004016 NA coding upstream 48625 29561349 ~ 29564564 (+)
AMCG00004010 NA coding upstream 222061 29380583 ~ 29391128 (+)
AMCG00004013 NA coding downstream 37285 29663803 ~ 29681594 (+)
AMCG00004023 NA coding downstream 357095 29983613 ~ 29998684 (+)
AMCG00004027 NA coding downstream 467784 30094302 ~ 30097720 (+)
AMCG00004024 rwdd1,LOC107587776,LOC107704860,LOC106579327 coding downstream 484568 30111086 ~ 30114969 (+)
AMCG00004026 NA coding downstream 504718 30131236 ~ 30137944 (+)
G5085 NA non-coding upstream 251510 29354521 ~ 29361679 (+)
G5005 NA non-coding upstream 660124 28952553 ~ 28953065 (+)
G4981 NA non-coding upstream 720158 28892684 ~ 28893031 (+)
G4917 NA non-coding upstream 1144245 28466917 ~ 28468944 (+)
G4837 NA non-coding upstream 1507482 28104210 ~ 28105707 (+)
G5129 NA non-coding downstream 57709 29684227 ~ 29685543 (+)
G5141 pou3f2,LOC106584047,LOC106605033 non-coding downstream 71149 29697667 ~ 29699224 (+)
G5185 NA non-coding downstream 482323 30108841 ~ 30109040 (+)
G5191 NA non-coding downstream 495577 30122095 ~ 30123181 (+)
G5198 NA non-coding downstream 519337 30145855 ~ 30146557 (+)
AMCG00004011 ccnc other upstream 71831 29527414 ~ 29541358 (+)
AMCG00003993 NA other upstream 929208 28640174 ~ 28683981 (+)
AMCG00003991 NA other upstream 1027515 28568184 ~ 28585674 (+)
AMCG00003990 NA other upstream 1147543 28454419 ~ 28465646 (+)
AMCG00003988 NA other upstream 1213448 28379811 ~ 28399741 (+)
G5245 NA other downstream 644692 30271210 ~ 30271524 (+)
AMCG00004039 NA other downstream 670349 30296867 ~ 30307175 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other downstream 1261477 30887995 ~ 30894827 (+)
AMCG00004079 NA other downstream 2773887 32400405 ~ 32402383 (+)
G5642 NA other downstream 3503602 33130120 ~ 33131186 (+)

Expression


Co-expression Network