AMCG00004036


Basic Information

Item Value
gene id AMCG00004036
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 30175559 ~ 30188592 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004036
TCCTGCCAAGCTAGCACCGATGCTCCAGGGCTTATCGGAGTAACAGCTCCTGGGGATATTATCATCGGTGGACTGTTCCCAGTTCATGAGCAAACTGTTCTATTGAACATTGGAGGGTTCACCCGGATGCTGGCTATGAAACATGCTATTGAAGTTATTAATAACTCGTCTCTGCTCAATGGACTTATGTTGGGGTATGAAATCTATGACTCGTGCTCCGATGTCTCCACTGCAATCAGGGCCACCATGGCCTTCCTGAACTATCCTGGAAGCTGCGCACAGGAGCACTACAACACAAGTGAGCCCCCCGTCAGAGTGCAGGCTGTGGTGGGAGAAGCCTACTCTGAAATTTCAATAGCTGTTGCACATCTATTAAATTTGGAGCTGATTCCACAAAACACAGATACTAAGATAAATCAAGCTATAAACACCATCCGCAAAAACCAAAGAGTAAATGTCATAGTTTCCTTTGCCAAGCCAGCGCATATGATGAAAATATTTGACTCTTTCTGTGAAGAAACTCTAGGCAAAATCTGGATTGCTAGTGACAGCTGGTCCATGTCGAAAGAAGTTATACACAAATCAAAGCTAACCaatattggaaaaataattggatttacatttaaaacaggaaatatcACACAATTTCAGAATTATCTCAACAGTCTTAAAATCAGTGAGGACACATTtaaggaaaacatatttttagacCATGACCAAGCAGATGTCGTGTTTTTGAATGACACtacaaacataaacaacacaCAGGAATCAGGAGTCAATGTCTTGATAAACAACTTACATCGTGATGCAGTATACAGTGTACAGATAGCAATTTCTGCTATTGCAAATGCCGTTGTATACCTCTGCAAAGAAATTAATTGCAAAGAACCTGCCAATATTCATCCCTATGAGAAAACTGAGTTTGAAAACGATGGAAAATCACTCAGATTTGATTCAAATGGGGACATTAACCTGGGCTACAATGTGGTGGTATGGAAGTCCTTCAATGGAGACATAGATGTTGATAATACAagtgtaatttcaaaatgttcagaGAGCTGTAAACCTGGCCaatttaagaaaacatctgAAGGACAGCACACCTGCTGCTACCAATGTACCAACTGTACAGATAATCATTATTCTAATGAT

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004036 True 1155 mRNA 0.40 5 30175559 30188592

Neighbor

gene id symbol gene type direction distance location
AMCG00004032 NA coding downstream 18848 30150312 ~ 30156711 (-)
AMCG00004033 NA coding downstream 51542 30116439 ~ 30124017 (-)
AMCG00004035 klhl32,LOC107704937,LOC107587857 coding downstream 97846 30058679 ~ 30077713 (-)
AMCG00004034 klhl32,LOC106584066 coding downstream 130167 30032565 ~ 30045392 (-)
AMCG00004022 LOC106581764 coding downstream 294768 29710977 ~ 29880791 (-)
AMCG00004031 NA coding upstream 16343 30204935 ~ 30206934 (-)
AMCG00004040 NA coding upstream 100443 30289035 ~ 30291854 (-)
AMCG00004043 NA coding upstream 380463 30569055 ~ 30590089 (-)
AMCG00004042 NA coding upstream 412994 30601586 ~ 30611123 (-)
AMCG00004044 NA coding upstream 443940 30632532 ~ 30639345 (-)
G5194 NA non-coding downstream 60548 30112383 ~ 30115011 (-)
G5181 NA non-coding downstream 72905 30102445 ~ 30102654 (-)
G5076 NA non-coding downstream 905638 29183092 ~ 29269921 (-)
G5032 NA non-coding downstream 1164750 29007691 ~ 29010809 (-)
G5012 NA non-coding downstream 1200292 28974978 ~ 28975267 (-)
G5269 NA non-coding upstream 349344 30537936 ~ 30538437 (-)
G5273 NA non-coding upstream 364385 30552977 ~ 30553218 (-)
G5315 NA non-coding upstream 554187 30742779 ~ 30743167 (-)
G5330 NA non-coding upstream 612171 30800763 ~ 30802575 (-)
G5333 NA non-coding upstream 624703 30813295 ~ 30813583 (-)
AMCG00004006 NA other downstream 846444 29324741 ~ 29329115 (-)
AMCG00003967 LOC107095448 other downstream 3305981 26830354 ~ 26869578 (-)
AMCG00003946 NA other downstream 4176931 25965420 ~ 25998628 (-)
G4521 fig4 other downstream 4273947 25897934 ~ 25901612 (-)
AMCG00003909 NA other downstream 5879313 24263907 ~ 24296246 (-)
AMCG00004041 NA other upstream 85214 30273806 ~ 30276227 (-)
AMCG00004052 NA other upstream 625189 30813781 ~ 30894824 (-)
AMCG00004060 NA other upstream 781087 30969679 ~ 30973496 (-)
G5502 NA other upstream 2120888 32309480 ~ 32309910 (-)
G5540 NA other upstream 2219210 32407802 ~ 32426563 (-)

Expression


Co-expression Network