AMCG00004042


Basic Information

Item Value
gene id AMCG00004042
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 30601586 ~ 30611123 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004042
TGTTTCCAGGTCCTGCCCAGGTGTGACCCGGCTGTGTGTCCTGCCATTTCAGACCTGGACCAGCCAGTGCTCACCGTGCACCAGACCATCAGTGATGTGCGTGGGAGCTACTACCAGGAGAAGACGGTGTTCTTGCGCTGCACTGTCAACTCCAACCCCCCCGCACGCTTCATCTGGAAACGCGGCAACAGCCCCATCGAGCAGAGCAAGGACAACGGCGTGGACATCTATGAGCCGCTTTACACACAGGGCGAGACAAAAGTGTTGAAACTGAAGAACTTGCGGCCACAGGACTTTGCCAACTACACGTGTCAGGTGTCTGTGCGCAACGTGTCCCCCCCAGCTCTGCGCCTCTCAGTGAATGAGACTCTGGTGGTCAACCCTGGTGATGACGTGACTCTCTCTTGTGAAGTGACGGGTGGGGAGCCCCCTCCCGTGGTGTCCTGGTCCCGGTACCCcaaccccctgccccccaatGCCCAGGTACGGGGGGGTAGCCTCACAATGCGCAGTGTCACCCCCCGAGACTCTGGCTTCTACAACTGCACCGCGGTCAACAATGTGGGCAACCCGGCCAAGAGGAACGTCAACCTTATTGTCagagTCATGAGGAACATAACCTTCCAGATCACGCCAGACTCCAACAAGGACAGCGAGACCATCCAGATGGGCCGCGACCTCAAGCTGTCCTGCCATGTAGACGCCCAGCCCCAGGACAAGGTCAACTATACCTGGTACAAGAACGGGGTGTCCGTGCAGCCCTCTGACAGCCTGGTGCTCCTGCGCAGTGACCCAGACATGGCGCCTGGGACCAGCAGCCTGGAGATCATCGACATGAAGTTCAGGGACCAGGCCACATACAGTTGTGTGGCTGGCTTCCTCGGCAGCGCTGTGCAAGAGCTGAGGGTGGATGTCAATATCACTCAGAGCAGTGTGACTCCTCCTGTGCTCTCGGTGCCCCCCGGTGGCAGCTTGGTGACAGTGCCAGAGGGCTCGGTGGCAGAGCTGGTGTGCCTTGTGGAGGGCAAGCCCCGCCCACCTGTGCTGTGGTCCCGGGCGGACAAGGACCTGCCCATGCCCTCGGGGGATTGGCTGGTGGAGACGCGGGACGGCCGGCTGCGCTTGACCAATGTGACGCGGGATCTGAGTGGCTCGTACCGCTGCCAGACAGCACCTTACAATGGGCTGAACATCAAGAAGAGGGAGGCTCAGGTGCAGCTCAATGTGCAGTtcGCCCCACTGGTGGATCCTGTGTTCCAGGACGTGCGCTCCCCGTCCTATCGGCCAGTGGTGCTGCGCTGCGCAGTGCTGAAGACCAATCCCACGCGGCTGGCTGGGGCCACCTGGATGCTGAATGGCGCCTTACTGCGCAGCCAGGGCGTGGAGCTGCAGGACGCTGCAGAGCTGCAGttttggaGATTAATGTTGAGGCTGGGGTTAGGTTTAGGCTTAGTCTGTtccagtttgtgttttaatatcctctctctctccccagccaGGGCCTACAACCCTGAGTTCTACTACGACACACCCAACCCCATCCGCATCCAGAAAGAGAACCGCAACTACACCTACAACCTGCAGTGGACACAGAAAGAGCCTGGCGCTGTGGACAGGGTCATCGGCTACTGGATCACAGTCAGACAGGTGAGTGAgggtgagaaagaaagagagggagggggaggaagagagagaaaaaggtcAGACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004042 True 1710 mRNA 0.59 7 30601586 30611123

Neighbor

gene id symbol gene type direction distance location
AMCG00004043 NA coding downstream 11497 30569055 ~ 30590089 (-)
AMCG00004040 NA coding downstream 309732 30289035 ~ 30291854 (-)
AMCG00004031 NA coding downstream 394652 30204935 ~ 30206934 (-)
AMCG00004036 NA coding downstream 412994 30175559 ~ 30188592 (-)
AMCG00004032 NA coding downstream 444875 30150312 ~ 30156711 (-)
AMCG00004044 NA coding upstream 21409 30632532 ~ 30639345 (-)
AMCG00004047 LOC107735505 coding upstream 115458 30726581 ~ 30733393 (-)
AMCG00004048 glo1,LOC107679178,LOC102787485,LOC105030941,LOC103022823,LOC107667967,LOC108426138 coding upstream 123773 30734896 ~ 30738621 (-)
AMCG00004046 NA coding upstream 168742 30779865 ~ 30781766 (-)
AMCG00004055 NA coding upstream 216000 30827123 ~ 30828505 (-)
G5273 NA non-coding downstream 48368 30552977 ~ 30553218 (-)
G5269 NA non-coding downstream 63149 30537936 ~ 30538437 (-)
G5194 NA non-coding downstream 486575 30112383 ~ 30115011 (-)
G5181 NA non-coding downstream 498932 30102445 ~ 30102654 (-)
G5076 NA non-coding downstream 1331665 29183092 ~ 29269921 (-)
G5315 NA non-coding upstream 131656 30742779 ~ 30743167 (-)
G5330 NA non-coding upstream 189640 30800763 ~ 30802575 (-)
G5333 NA non-coding upstream 202172 30813295 ~ 30813583 (-)
G5387 NA non-coding upstream 232555 30843678 ~ 30846301 (-)
G5393 NA non-coding upstream 279063 30890186 ~ 30959114 (-)
AMCG00004041 NA other downstream 325359 30273806 ~ 30276227 (-)
AMCG00004038 LOC105015767 other downstream 381451 30184618 ~ 30220135 (-)
AMCG00004006 NA other downstream 1272471 29324741 ~ 29329115 (-)
AMCG00003967 LOC107095448 other downstream 3732008 26830354 ~ 26869578 (-)
AMCG00003946 NA other downstream 4602958 25965420 ~ 25998628 (-)
AMCG00004052 NA other upstream 202658 30813781 ~ 30894824 (-)
AMCG00004060 NA other upstream 358556 30969679 ~ 30973496 (-)
G5502 NA other upstream 1698357 32309480 ~ 32309910 (-)
G5540 NA other upstream 1796679 32407802 ~ 32426563 (-)
G5566 NA other upstream 1982504 32593627 ~ 32596407 (-)

Expression


Co-expression Network