AMCG00004048 (glo1,LOC107679178,LOC102787485,LOC105030941,LOC103022823,LOC107667967,LOC108426138)


Basic Information

Item Value
gene id AMCG00004048
gene name glo1,LOC107679178,LOC102787485,LOC105030941,LOC103022823,LOC107667967,LOC108426138
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 30734896 ~ 30738621 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004048
CGAGTACGAAGTCCTCCACAGTGGCCTGGTCCATCGCAAGCCTGTGGCTAAAATACCCAGGATGGACTTGTGTGCTGGAGTCAGCTTCACCCTGCgggcctccctctcttccttaTACCTGGCCtgTGCAGTTGCAGCTCGGCCTGGCAGCCGCCTACACGGTACACCTCTCCGCCGAGTCAGGGCACATTCCTCTGCGCCTGCCCCGCGATCCCTCCCCGTCCTGGATCCGCCTGTGGGCGAATGCACCGCTCCCTGTTTGCTCTGCCTGGACTCGCCGCCCGTCGCTGTCTGTACGCCCGCTTCACTTCCCAGACCCCCGTCCCGCACAGCACCATGGCCGAGGAAGGGCTCTCCAACGACGCGGTGGCAaaatgctgcaaggaggcatccCCCATAACCAAGGACTTCATGATGCAGCAGACCATGCTCAGGGTGAAGGACCCAAAGAAATCATTGGACTTCTACACCAGCATCCTGGGCATGACCCTGCTGCAGAAGTTTGATTTCCCCTCCATGCGTTTCACTCTGTACTTCCTGGGTTACGAGGATAAGAAGGAGATTCCCGGGGATGTGAAGGAGAGAACGGCCTGGACCTTCTCCCGCCGAGCCACCATCGAGCTCACACACAACTGGGGCACTGAGTCTGAAGAGAACCAGTCGTATCACAATGGCAACACGGACCCGCGCGGCTTTGGCCACATTGGGATCGCAGTGCCTGATGTGTACGCGGCCTGTAAGATGTTCGAGGAGCATGGAGTGACATTCGTCAAGAAACCAGACGATGGTAAAATGAAAGGTCTGGCATTCATACAGGACCCTGATGGATACTGGATTGAGATTCTCAGCCCAAACAACATGGTCTCCATCACTGCGTAGACTGAGAGAAGAATATAGGGGGGATAATTGGGGTTAGGAAGCATGGGGGGGGGAAATGGGTGCAGGAGAACATAGGTTGTTAAAAGAGAGCACactggaagaggaggaggagaagaattAGAAgaggagaaggcagggaaaggAAGGATGGATGGAAggatggatggagggagggatgg

Function

symbol description
glo1 Predicted to enable lactoylglutathione lyase activity and metal ion binding activity. Is expressed in several structures, including alar plate midbrain region; digestive system; eye; midbrain; and segmental plate. Human ortholog(s) of this gene implicated in autistic disorder; diabetic retinopathy; end stage renal disease; type 2 diabetes mellitus; and vascular disease. Orthologous to human GLO1 (glyoxalase I).

NR:

description
PREDICTED: lactoylglutathione lyase-like

GO:

id name namespace
GO:0004462 lactoylglutathione lyase activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K01759 GLO1, gloA; lactoylglutathione lyase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004048 True 1058 mRNA 0.56 7 30734896 30738621

Neighbor

gene id symbol gene type direction distance location
AMCG00004047 LOC107735505 coding downstream 1503 30726581 ~ 30733393 (-)
AMCG00004044 NA coding downstream 95551 30632532 ~ 30639345 (-)
AMCG00004042 NA coding downstream 123773 30601586 ~ 30611123 (-)
AMCG00004043 NA coding downstream 144807 30569055 ~ 30590089 (-)
AMCG00004040 NA coding downstream 443042 30289035 ~ 30291854 (-)
AMCG00004046 NA coding upstream 41244 30779865 ~ 30781766 (-)
AMCG00004055 NA coding upstream 88502 30827123 ~ 30828505 (-)
AMCG00004054 ppp1cb,LOC104966956,LOC107583611 coding upstream 112254 30850875 ~ 30856059 (-)
AMCG00004053 NA coding upstream 121471 30860092 ~ 30882508 (-)
AMCG00004061 slc30a10,ypel5,LOC107601641,LOC107672346,LOC107683860,LOC107568027 coding upstream 193682 30932303 ~ 30937309 (-)
G5273 NA non-coding downstream 181678 30552977 ~ 30553218 (-)
G5269 NA non-coding downstream 196459 30537936 ~ 30538437 (-)
G5194 NA non-coding downstream 619885 30112383 ~ 30115011 (-)
G5181 NA non-coding downstream 632242 30102445 ~ 30102654 (-)
G5076 NA non-coding downstream 1464975 29183092 ~ 29269921 (-)
G5315 NA non-coding upstream 4158 30742779 ~ 30743167 (-)
G5330 NA non-coding upstream 62142 30800763 ~ 30802575 (-)
G5333 NA non-coding upstream 74674 30813295 ~ 30813583 (-)
G5387 NA non-coding upstream 105057 30843678 ~ 30846301 (-)
G5393 NA non-coding upstream 151565 30890186 ~ 30959114 (-)
AMCG00004041 NA other downstream 458669 30273806 ~ 30276227 (-)
AMCG00004038 LOC105015767 other downstream 514761 30184618 ~ 30220135 (-)
AMCG00004006 NA other downstream 1405781 29324741 ~ 29329115 (-)
AMCG00003967 LOC107095448 other downstream 3865318 26830354 ~ 26869578 (-)
AMCG00003946 NA other downstream 4736268 25965420 ~ 25998628 (-)
AMCG00004052 NA other upstream 75160 30813781 ~ 30894824 (-)
AMCG00004060 NA other upstream 231058 30969679 ~ 30973496 (-)
G5502 NA other upstream 1570859 32309480 ~ 32309910 (-)
G5540 NA other upstream 1669181 32407802 ~ 32426563 (-)
G5566 NA other upstream 1855006 32593627 ~ 32596407 (-)

Expression


Co-expression Network