AMCG00004055


Basic Information

Item Value
gene id AMCG00004055
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 30827123 ~ 30828505 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004055
ATGCTGAGTCTctgggcacagagagagaatcGTGATCTGGACTACATGTTTTACTTTCCTGTGGAAACCTTGAGCCGCATCTCAAATCCCATCAGCCTGAGATCCCTTCTGTTTAATAAGTACCGACTCCCAGGGGAAGGAGCTGATGAAGTGTTTCAGGATATTGCTGAGAATTCAGATATTGTGGTCATCATTATCGATGGCATCACTGACAGCATGCTGAATTCAGACATTGAGACTTCAAACACTGCAGACGTCACCATCAGATCACTGGTTTACAGTATTGTGAAGAAGGAGCTTCTGCCAGAGGCCAAGATTGTCATTACCTGCCGCCCAGAACGAGAGTATCTCCTGTCAGATCTTTCTGACTGGCCGAGCTACAGAGTAGAGGTGCTGGGCTTCAGTGAGGAATCCATCGGTGTTTACTTTAAGACTGTGTTGGGAAGCACCAAGGGTGGAGATGCAGGCAGAGTCCTGGAGAACCTGGAGCTGCTCAGTCTCTGTCATGTCCCAATGTATGCCTTCATAGTCTCtgccaacattttatttacatctcCTGAGGCTGGCAGACAGCAGTCCAGTATAACTGAACTATACCTGCACATCTTCCGCCACTGCATGGAAAGACATgctgagaaggagagagggaggtctGTGAGGAAGCATCTGGATAAATACATTGAGGAAAACAGGCAGGACATTATGACTTTAGCTGAAGCCTCTTTACAGGCAATGCTGCAAAAGAGTGTCAATTTATGTGGTGTCAGTATTGAGGAAAGTAGTGTACAGCAAGCTTTCTTATGGTCAACAGATGTCAGAGATTCACTAACATCTATAGAAACCATCTGTGCATTTCTCCACAACACAGTGCAGGAGTTCTGGGCTGCTCTTTGGCTGCTGGAGAAACCTGACCAAATCAGAGAGATACTGCGTCAGTGCAGGACTGACGAGGAGAAGCATCTGAAGTACATGGTTGTGTTCTTGTGTGGGCTTCTGTCCAGTAAAAACACCAGGCTTGTGAGATGTCTGATTCCAGAGAACAAGATCAGGGAAAACTCTGCCAGATACCTTAAGGAAGTCATAGATAGTCTCCTGGACGAGGACCCAGATGAGCTCGAGGACCCTGAGAACAtcatctctgtgtgtcagtgcttgTACGAGTCACAGTCACAGGACGCTTGTTTGTACTTTCTGGAGAGAATTGAGTATCGCTTTGACCTGAGTGACGAGCAGCTTGATCCTCACCAGTGCTGCACAGTCTCCTATGTCATTAGCCAGTCGCAGGGGGCAAAGGTCAATCTGAACCTGCAGAACTGCACTCTGTCTGACACGGGCCTGAAGCTGTTCCTGGGCTGCTTGCACAATGTTGCATTTCTCAGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004055 True 1383 mRNA 0.48 1 30827123 30828505

Neighbor

gene id symbol gene type direction distance location
AMCG00004046 NA coding downstream 45357 30779865 ~ 30781766 (-)
AMCG00004048 glo1,LOC107679178,LOC102787485,LOC105030941,LOC103022823,LOC107667967,LOC108426138 coding downstream 88502 30734896 ~ 30738621 (-)
AMCG00004047 LOC107735505 coding downstream 93730 30726581 ~ 30733393 (-)
AMCG00004044 NA coding downstream 187778 30632532 ~ 30639345 (-)
AMCG00004042 NA coding downstream 216000 30601586 ~ 30611123 (-)
AMCG00004054 ppp1cb,LOC104966956,LOC107583611 coding upstream 22370 30850875 ~ 30856059 (-)
AMCG00004053 NA coding upstream 31587 30860092 ~ 30882508 (-)
AMCG00004061 slc30a10,ypel5,LOC107601641,LOC107672346,LOC107683860,LOC107568027 coding upstream 103798 30932303 ~ 30937309 (-)
AMCG00004062 NA coding upstream 111651 30940156 ~ 30945990 (-)
AMCG00004063 eprs,LOC107679779,LOC107732550,LOC107662594 coding upstream 122350 30950855 ~ 30955886 (-)
G5333 NA non-coding downstream 13540 30813295 ~ 30813583 (-)
G5330 NA non-coding downstream 24548 30800763 ~ 30802575 (-)
G5315 NA non-coding downstream 83956 30742779 ~ 30743167 (-)
G5273 NA non-coding downstream 273905 30552977 ~ 30553218 (-)
G5269 NA non-coding downstream 288686 30537936 ~ 30538437 (-)
G5387 NA non-coding upstream 15173 30843678 ~ 30846301 (-)
G5393 NA non-coding upstream 61681 30890186 ~ 30959114 (-)
G5432 NA non-coding upstream 160367 30988872 ~ 30990100 (-)
G5463 LOC108443926,LOC105894840 non-coding upstream 541495 31370000 ~ 31371409 (-)
G5465 NA non-coding upstream 558079 31386584 ~ 31387033 (-)
AMCG00004041 NA other downstream 550896 30273806 ~ 30276227 (-)
AMCG00004038 LOC105015767 other downstream 606988 30184618 ~ 30220135 (-)
AMCG00004006 NA other downstream 1498008 29324741 ~ 29329115 (-)
AMCG00003967 LOC107095448 other downstream 3957545 26830354 ~ 26869578 (-)
AMCG00003946 NA other downstream 4828495 25965420 ~ 25998628 (-)
AMCG00004060 NA other upstream 141174 30969679 ~ 30973496 (-)
G5502 NA other upstream 1480975 32309480 ~ 32309910 (-)
G5540 NA other upstream 1579297 32407802 ~ 32426563 (-)
G5566 NA other upstream 1765122 32593627 ~ 32596407 (-)
AMCG00004102 NA other upstream 2737581 33566086 ~ 33567325 (-)

Expression


Co-expression Network