AMCG00004067


Basic Information

Item Value
gene id AMCG00004067
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 31030418 ~ 31039737 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004067
ATGCAGAGATCTTTTTCTCCTCCCCACACACCCCCCAGTGTCAGCAACACTGGCACAGCCCACTGCTCCTCTGAGGGCCACCAGGTTGCCTGCTCTGTGCTATATGATGAGCCGCCCAGGAATGAGGAAGCACACGCCCCTGGGGACATCCTGCTGGGGGGGCTCCTGCCCTTCCACGCCACTGTGGGGACTGAGCTGAGGACACAGCCGAATGGATTCAACTGCACACAGTTTGACTGGATGCCCTTCGCGCTACAGATGGCCACGATCCTCAGCATCGAGCAGATCAATGAGTCTGGCTTCCTGCCCGGGGTGAAGCTGGGCTACATCATATGTGATACCTGCTCTGATGCCATCAAGGCCCTGCAGGGTGCACAGGTGCTGCTCTCGCTCAATGGCAGCCTGGACATCCACTGCAACTACAGCGACTACGCCCCCCTCGTGAAGGCTGTAGTGGGGGGGCGCTACTCTGAGGAGTCCATCGCGATTGCCAAGCTACTGGGTCTTTACATGGTCCCCCAGATTAGCTGGACATCATCGGCGGCAGCACTGTCCGACAAGCAGCGCTTCCCCTCCTTCCTGCGCACCATCCCCAGTGATGTTTACCAGACGCGGGCAATGGCGAGACTGATTTCGCACTTTGGCTGGGACTGGGTGGGCGTGGTATCTGGGGACGACGACTATGCCAAGGCGGCGATGGAGAGTTTCCTGCGTGATGCAGATGAGCAGGGGGTGTGCGTGGCCTACAAGGAGATGATGCCACACTACCTGGGTGACAAGAACAGTGAGCGACGCATACTGGAGGTAGCCTCCACGATCCGCAACTTCCAGGCCAAAGTGGTGGTGCTGATTCTCAAGGGCGAGCTGGTAAACGAGCTCTTTCAGGAGATGATCCGCACCAACACATCCAAGATCTGGATTGCCAGCGACGCCTGGTCTTTGTCTCGGCTTGTTGCCAATATGGAAGGCATCAACCAGGTGGGGGAGATCTTTGGCTTTACCTTCACCACTGGCAACATTCCCGGCTTCTCAGAGTACCTGCAGAAGTTGCGGCCCGCCCCGAACACCACCAACCGTTTCATCGAAGAGTACAAGGAGTTGCGCTTCTCCTGCCCCCCTGAGCTTCGCCAATACAACCAGTGCCTGAAGAATCAGCCACCCACATGGTGCCCCATCCCCCAAATCCCCAACTTGGCAATGAAATCTCCAAAAGCCTGTGAGGTGGTGGACCCCCAGGTAGAGGATGATGACTTCCTGTTGAAGGCGATCGACTTAGGTGTGGCCTATGGCAGTAGGCAGGCTGTCTGGGCCTTGGCACATGCCCTCCACAGTCTTCTGCGATGCAACCAGACTGCCTGCCCTGGTCCCAGGAATTTTCCTCCCTGGcagCTTCTGCAGGAGCTTAAGAAGGTGAACTTCACCCTGGACGACAACCAGTTCTACTTCAATGAAAATGGGGACACTGTAGACGGCTATGACCTGATCTTCTGGAGCAGGCAGGGACTAAAGCGTGTCTTCAAAGTAGTCGGCAGATACCGTGTGAGCCAGGGGACCGTGGAGGTCAACACAGACATGCTACTCTGGAGTACTCCCGACAACAAAGTCCCTCCGTCTCAGTGCTCTGAGCCCTGTCAGCCGGGCATGTGGAAGAATGTCTTCAACATCTCCTGTTGCTACAACTGCACTAAGTGTTTGGAGGGAACCTACTCTGACCAAAAAAACATGGTGGAATGCCTGAAGTGCCCCAATGGCACCTGGTCTCTGCAGGGTGCCACAGAGTGCCAGCCCAAGGTGGAGACTTTCTTGAGCTGGACCGATGCCTACACCATTGCTCTACTGGTGTTTGCTGGGCTGGGGCTGGTGACTTTGGCAGCCATGCTGGTGATCTTTGTGACACACTGGAACACCCCCACAGTGAAGGTAGCAGGGGGCCCGCTGGTCTACCTCATGCTAGCCTCCCTGGCGGTCAACTTCTGCAGCATTGTGCTGTTCATAGGGCGGCCAGTCGACCACATGTGCCGGGCGCGGCAGCCCCTGTATGGCATCAGCTTCAGCCTGTGCGTCTCCTGTATCCTGGTCAAGAGTTTCCGCACCTTCTTGGCCTTCCTCTTTGACCTGAATGTCAAACTGAGGATGAAGAAGCTGGACAACACATCCGAGGCCTACCTGAGAGAGGTGCGCAAGTCCGTCTTCTCCCTGGACACCACGCTCTCGCAGGTCAGCGTGCAGCACTCAGCTGCCGCCTCCACCGACCTCGACCCTGACCTCAACCTCGACTTGGATCTGGACGTTGACCCAGACCCTAACGAGTTCACCCTCCCTCCAAGCCACAAGCTCAGGCGGAGGAGACGTAGTAGCTGGTAG

Function

GO: NA

KEGG:

id description
K04622 GPRC6A; G protein-coupled receptor family C group 6 member A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004067 True 2364 mRNA 0.57 8 31030418 31039737

Neighbor

gene id symbol gene type direction distance location
AMCG00004065 NA coding upstream 40318 30974976 ~ 30990100 (+)
AMCG00004057 NA coding upstream 61214 30961633 ~ 30969204 (+)
AMCG00004064 NA coding upstream 82941 30945472 ~ 30947477 (+)
AMCG00004058 NA coding upstream 101927 30924788 ~ 30928491 (+)
AMCG00004059 NA coding upstream 117267 30897076 ~ 30913151 (+)
AMCG00004066 NA coding downstream 7408 31047145 ~ 31062709 (+)
AMCG00004071 LOC105894840,LOC108443926 coding downstream 330645 31370382 ~ 31371158 (+)
AMCG00004078 NA coding downstream 1265754 32305491 ~ 32329172 (+)
AMCG00004075 NA coding downstream 1295655 32335392 ~ 32346595 (+)
AMCG00004080 bre coding downstream 1388722 32428459 ~ 32428913 (+)
G5417 NA non-coding upstream 37518 30992606 ~ 30992900 (+)
G5297 NA non-coding upstream 252148 30778047 ~ 30778270 (+)
G5291 NA non-coding upstream 289545 30740564 ~ 30740873 (+)
G5272 NA non-coding upstream 477204 30552977 ~ 30553214 (+)
G5271 NA non-coding upstream 484893 30545287 ~ 30545525 (+)
G5482 NA non-coding downstream 746597 31786334 ~ 31786883 (+)
G5490 NA non-coding downstream 989267 32029004 ~ 32029301 (+)
G5493 NA non-coding downstream 1151583 32191320 ~ 32191542 (+)
G5499 NA non-coding downstream 1229011 32268748 ~ 32269071 (+)
G5501 NA non-coding downstream 1269768 32309505 ~ 32309912 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 135591 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 723243 30296867 ~ 30307175 (+)
G5245 NA other upstream 758894 30271210 ~ 30271524 (+)
AMCG00004011 ccnc other upstream 1489060 29527414 ~ 29541358 (+)
AMCG00003993 NA other upstream 2346437 28640174 ~ 28683981 (+)
AMCG00004079 NA other downstream 1360668 32400405 ~ 32402383 (+)
G5642 NA other downstream 2090383 33130120 ~ 33131186 (+)
AMCG00004138 fkbp1b other downstream 3813126 34852863 ~ 34870320 (+)
AMCG00004158 NA other downstream 4712713 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 4987542 36027279 ~ 36045282 (+)

Expression


Co-expression Network