AMCG00004069


Basic Information

Item Value
gene id AMCG00004069
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 31067311 ~ 31075673 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004069
ATGGTCGGGGAGCAGTTGGTTCCCCTGCTGATCGCAGCCGGTGGGGGGGGCCGGGGCTACAGCAGCCGCAGCTTGGACAGTGAGAGGGAAGAGCTTCTGGAACAGGACCTGTTAGTGCCGGGGCTGAACGGGCGCTCAGGGGCCGCAGggggAGGTGGAGGCTGGAATGACAGCTCCCCAGTGCCCTGGGGGGGGCAGCCGCTAGCCCTGGGGGCGCAGGGGGGGCAATCTTGCCCACAGGCTCTCCGGACGTTGGCTTGGCAGACCCGGGGGGGCTTTGGTGGTGGAGGGGGTGCCTGCTCCTCCggtgggggtggaggaggtTACATCGGTGGCAGTGCCGCCAGGGACAATGACCTCAGGAAGGACGGAGAGGACGGGGTGTCTTTCATCCACCCAGATGGAGAAGTGTACATGGATCCTCTGAAAGTGATGGACAGTCATGGTGAGGTGGTGATAACTCTGACAAAGAACTGCAGTCACTGTGAGATGGGAGAGTGTCACATGAAGGACAAGGAAATCGAGTGTTACTGTGAGCATGGGAAACATCTGGCCCTTGACCGGGTCACCTGTATGGACCCTACAGTGTACCGGCGGAAGCACACGGAGCTGCAGTCCATTCAGCTGGAGCTGCAGAGCCCCGACTGCAAGCTGAGCAAACTGCGAACCTCCACCATCATGACCGACTACAACCCCAACTACTGCTTCGCCGGCAAGACCAGCTCCGTCACTGACCTGAAGGAGGTGCCACGGCGCAACATCTCACTCACCAGGGGCCTGGGTCATGGAGCATTTGGAGAGGTGTATGAGGGGCTGGCAGTGGGGATCCCCGGGGAGCCCAGCCCCATGCATGTGGCCGTCAAGACTCTGCCGGAGGTGTGTTCAGAGCAGGACGAACTGGACTTCCTCATGGAGGCGCTGATCATCAGtAAGTTCAGTCACCAAAACATTGTGCGCTGCATCGGGGTGAGTCTGCAGGCTCTGCCACGCTTCATCTTGCTGGAGCTGATGGCCGGGGGGGACCTCAAGACCTTCCTCAGGGAGACACGGCCACGACTGgagcaGCCCTCCAGTCTATCTATGGTGGACCTGCTGAACGTGGCACGAGACATTGCCCGGGGCTGCCAGTACCTGGAGGAGAACCACTTCATACACAGGCGAGTCACTCTGGACATTGCAGCCAGGAACTGTCTGCTCACATGCAAGGGACCAGGAAGAGTGGCCAAAATTGGAGATTTTGGAATGGCCAGGGATATCTACAGgTCATTTGGAGTGCTCCTGTGGGAGATCTTCTCCCTGGGCTACATGCCATACCCCAGCCGCAGCAACCAGGAGGATCCCGATGTGGTGAACATGCCCCTCCCGGTGGAGTACGGCCCAGccccagaggaggaggagaaggtgcCCATGAGACCCGAGGACCCAGGCAGCACCCCCTCCTTGCTGGTGTCACCCCAAGCCCAGGCAGTAGAAGGGGGCAGCGGAGGAGAGCAGGgcggaggaggagatgaagggagaggaaaaagaggAGAGGGTCCCTACCTGcagcccccccctccccagcacTCCCAGAACAGCCACCCTCCCCCGCCAGCCCCGCCCAGTCACACCCAGCCTGAGGGAGGTGGGCACGTCAACCTGGCCTTCTCCCAGGGCCAGCCATCCGAAAGGGAGACCCACAACGGGAAGCCCACCAACCTCTGGAACCCCACCTACGGATCCTGGTTCCTGCAAcagcagcagaagcagaagcagaagcagcGGGTGCCAGGGGAGGGGCAAGAGACGGGCAGCAGGACTGTCGGGGAGGCTGCTGGGGCAGGGGGCGGAGGAGGTGGAGTAGGGGGGCAGTTACAGCTCCAGCTTCAGCAACTACAACAACTGCCTGGTTCCTGCAGGCCTCTGCTCCCTCCTCCAccgccacctcctcctcctcctcctcccccacctcctGCCCCTCCATCTTCTCATGCCaccacccccaaccccctcgTCCTTGAGCCCTCTGCCCTCCCGCCCATCCCCCTTTTCAGACTGCGCCGCTTCCCCTGTGGAAACATAGGCTATGGGTACCAGGAGCAGGGTCTGCCCCTCGAACCCACCACCACCCAGCCAACTGCCCCACTGCCCCCTCCTCCACCTCAGAGGCCTGTCTCGCTCGGCCGGACGGCCACCTCCGAGGAC

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004069 True 2184 mRNA 0.63 12 31067311 31075673

Neighbor

gene id symbol gene type direction distance location
AMCG00004068 NA coding downstream 45146 31013145 ~ 31022165 (-)
AMCG00004063 eprs,LOC107679779,LOC107732550,LOC107662594 coding downstream 111425 30950855 ~ 30955886 (-)
AMCG00004062 NA coding downstream 121321 30940156 ~ 30945990 (-)
AMCG00004061 slc30a10,ypel5,LOC107601641,LOC107672346,LOC107683860,LOC107568027 coding downstream 130002 30932303 ~ 30937309 (-)
AMCG00004053 NA coding downstream 184803 30860092 ~ 30882508 (-)
AMCG00004070 NA coding upstream 1240 31076913 ~ 31091307 (-)
AMCG00004072 NA coding upstream 243922 31319595 ~ 31320594 (-)
AMCG00004074 NA coding upstream 462235 31537908 ~ 31539407 (-)
AMCG00004073 lrfn2,LOC106597048,LOC106582474 coding upstream 483010 31558683 ~ 31568015 (-)
AMCG00004077 supt7l,LOC107656753,LOC107726086,LOC107553729,LOC107737450,LOC107697525 coding upstream 1255653 32331326 ~ 32333781 (-)
G5432 NA non-coding downstream 77211 30988872 ~ 30990100 (-)
G5393 NA non-coding downstream 108197 30890186 ~ 30959114 (-)
G5387 NA non-coding downstream 221010 30843678 ~ 30846301 (-)
G5333 NA non-coding downstream 253728 30813295 ~ 30813583 (-)
G5330 NA non-coding downstream 264736 30800763 ~ 30802575 (-)
G5463 LOC108443926,LOC105894840 non-coding upstream 294327 31370000 ~ 31371409 (-)
G5465 NA non-coding upstream 310911 31386584 ~ 31387033 (-)
G5467 NA non-coding upstream 458274 31533947 ~ 31534379 (-)
G5476 NA non-coding upstream 595690 31671363 ~ 31671579 (-)
G5483 NA non-coding upstream 710661 31786334 ~ 31786944 (-)
AMCG00004060 NA other downstream 93815 30969679 ~ 30973496 (-)
AMCG00004052 NA other downstream 172487 30813781 ~ 30894824 (-)
AMCG00004041 NA other downstream 791084 30273806 ~ 30276227 (-)
AMCG00004038 LOC105015767 other downstream 847176 30184618 ~ 30220135 (-)
AMCG00004006 NA other downstream 1738196 29324741 ~ 29329115 (-)
G5502 NA other upstream 1233807 32309480 ~ 32309910 (-)
G5540 NA other upstream 1332129 32407802 ~ 32426563 (-)
G5566 NA other upstream 1517954 32593627 ~ 32596407 (-)
AMCG00004102 NA other upstream 2490413 33566086 ~ 33567325 (-)
AMCG00004116 NA other upstream 2799768 33875441 ~ 33918321 (-)

Expression


Co-expression Network