AMCG00004070


Basic Information

Item Value
gene id AMCG00004070
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 31076913 ~ 31091307 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004070
ATGAACCCGGCTGTctgccctcctctctctGTGCGCTTCTGGCTGTGCATGGGTGGGCGGCAGCAGGTAGCCCTGTCGGTGAGCGCGGTGGAGAACAGCACGGAGCTGCAGCAGCACACTCTGTGCCCCTCCAGAAGCATGGCGGGGGGGCAGGCCTGGGACCTCATTACCCTGGAACTCTACGGACTGACAGACTGGTTCTATCTGCAGTTCAGTGTGGAGGGCAAAAGAGACAGGTCTGGAGCTGCCATCCTCCTGGACAATGTCTCCCTCAGTCTGGACTGCTTCCTAGCCTCCAATGGCGAGCTGCCGCCCCAGACGACCCGGGAACCCAGCTTCACGACAGCCGCCCCAGTCACCGAGCTTCCCAGCTCCACCACACAGCCTCTGCAGAACTTTGAAGGGTCAACAAGGATGCCAAGACCCAGCTGTGGGGCGGCGGGGCCTCTGGGGCCGAACCCCACGCAGTGCAGCAACACCTACCGCGACAGCCAGGTCAATGTCACCGTGGCCACTGAGTGGCCACTCAAGGGGGTCCAGATCTGGAGAGTGCCGGAGACAGACACCTACAGGATCACGGGGTACGGGGCCTCGGGGGGGCGCAGCGTGGAGTTCACAGAGAGGTCACATGGCGTGTACATGGTGGGGGACTTCCATCTACAAAAAGACGACCATCTCTACATCCTGGTGGGACAGCAGGGCGAGGACGCCTGCCCCAATTCAAACCCCACTCTGAACAAGATATGTCTGGGGGAGACCAGTCTGATTGATGACAAGACCATggcaggaggtggaggtggagggggtggggcgACCTATGTGTTCAAGGCAAGTGAAAGTTGGCTGTTGCTGACATACTTTTCATGCTATGGAAACCTATGGAACTCATTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004070 True 894 mRNA 0.60 8 31076913 31091307

Neighbor

gene id symbol gene type direction distance location
AMCG00004069 NA coding downstream 1240 31067311 ~ 31075673 (-)
AMCG00004068 NA coding downstream 54748 31013145 ~ 31022165 (-)
AMCG00004063 eprs,LOC107679779,LOC107732550,LOC107662594 coding downstream 121027 30950855 ~ 30955886 (-)
AMCG00004062 NA coding downstream 130923 30940156 ~ 30945990 (-)
AMCG00004061 slc30a10,ypel5,LOC107601641,LOC107672346,LOC107683860,LOC107568027 coding downstream 139604 30932303 ~ 30937309 (-)
AMCG00004072 NA coding upstream 228288 31319595 ~ 31320594 (-)
AMCG00004074 NA coding upstream 446601 31537908 ~ 31539407 (-)
AMCG00004073 lrfn2,LOC106597048,LOC106582474 coding upstream 467376 31558683 ~ 31568015 (-)
AMCG00004077 supt7l,LOC107656753,LOC107726086,LOC107553729,LOC107737450,LOC107697525 coding upstream 1240019 32331326 ~ 32333781 (-)
AMCG00004076 NA coding upstream 1258646 32349953 ~ 32363126 (-)
G5432 NA non-coding downstream 86813 30988872 ~ 30990100 (-)
G5393 NA non-coding downstream 117799 30890186 ~ 30959114 (-)
G5387 NA non-coding downstream 230612 30843678 ~ 30846301 (-)
G5333 NA non-coding downstream 263330 30813295 ~ 30813583 (-)
G5330 NA non-coding downstream 274338 30800763 ~ 30802575 (-)
G5463 LOC108443926,LOC105894840 non-coding upstream 278693 31370000 ~ 31371409 (-)
G5465 NA non-coding upstream 295277 31386584 ~ 31387033 (-)
G5467 NA non-coding upstream 442640 31533947 ~ 31534379 (-)
G5476 NA non-coding upstream 580056 31671363 ~ 31671579 (-)
G5483 NA non-coding upstream 695027 31786334 ~ 31786944 (-)
AMCG00004060 NA other downstream 103417 30969679 ~ 30973496 (-)
AMCG00004052 NA other downstream 182089 30813781 ~ 30894824 (-)
AMCG00004041 NA other downstream 800686 30273806 ~ 30276227 (-)
AMCG00004038 LOC105015767 other downstream 856778 30184618 ~ 30220135 (-)
AMCG00004006 NA other downstream 1747798 29324741 ~ 29329115 (-)
G5502 NA other upstream 1218173 32309480 ~ 32309910 (-)
G5540 NA other upstream 1316495 32407802 ~ 32426563 (-)
G5566 NA other upstream 1502320 32593627 ~ 32596407 (-)
AMCG00004102 NA other upstream 2474779 33566086 ~ 33567325 (-)
AMCG00004116 NA other upstream 2784134 33875441 ~ 33918321 (-)

Expression


Co-expression Network