AMCG00004077 (supt7l,LOC107656753,LOC107726086,LOC107553729,LOC107737450,LOC107697525)


Basic Information

Item Value
gene id AMCG00004077
gene name supt7l,LOC107656753,LOC107726086,LOC107553729,LOC107737450,LOC107697525
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 32331326 ~ 32333781 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004077
ATGATGCGCTACTGGGGGGAGATCCCGGTGCCGGCTGGGCCACCCAGCCGCAGCTCTTTTGACCTGTTGCAGCGGGAGTTCCGCTCAGTGGAGGTGCAGGACCCCCCGCTGCACCAGCCCTCCGCCCAGCGCCCACGGCCCACCACCATGCTGGACGTGCCCTCCGAGCCCTGCAGCCTGACCATCCACACCGTGCAGCTGTGCCAGCATGCTCGCCGCCTGCGGAGCCTCCTCGCTACTGCACAGGGTCAACCCCCAGCGGAGGGCGGGGGGAGGCCAGAGGACACTGAcaccctgcccccccgcccccccacgcCTGCCCTGCCCGATGACCTGTTGCCCCTCGACAGCAAGGCCCCCCGCCAGCCCTTCCAGCTGCGCCACAGCGACCCCGAGAGCGATTTCTATAAAGGTAAAGGGGAGCCGGTGACAGAGCTGAGTTGGCCGTCCTGCCGGCAGCTGCTGTACCAGTCTGTGGCCACGGTACTGGCCCATGCTGGGTTTGAGACGGCACAGGAGAGCGTACTGGAGACTTTGACGGACGTGGCGCATGAGCACTACCTGCGCCTGAGCCGACTGCTGCGTGTGGCAGTGGACCGTGAGGCCCGGCTGGGGGCCACTCCCTTCCCTGACGTGGTGGAGCAGGTGTTCCATGAGGTGGGCATCGGTAGCGTGCTCGCCCTGCAGCGCTTCTGGCAGCACCGCATCAAGGACTACCACAGCTACATGCAGCAGGTGAGCCGGGAGCTGTCGGAGGAATATGAGCGGCTGGTGAACCCAGAGAAGGCTGCAGAGGACTCCAAGCCCCTCAAGATCAAGGAAGAGCCTCTGAGTGACATTGCCTTTCCTGTCAGCGAGGAGCCTGAGGCCGACCTGGCGTCTGGGGACCAGGCCCTGCCCATTGGGGTCTTGGGGGCCCCCAGTGAAAGGCTGCCTAGTGGGCTGGAGGCAGAGAACTCCCCACATACTGCAGGGACGGCAGGCACCAGCTCTCCACTGTGGCAGTTGGCGCAGGTGAAGATGGAGCCACAGGATGGAGAGGACGGACAAGTGTCAGGGCACGGTGTGCTGGGAGGAGACGTGTTTGAGGAGCCCATGTCCACCATGAGCGAGGCCGGCCTCCCACACTCGCCCAGCGCGGCCGGCTCCGACGCCAGCTACGGCTCGCACTCCCCGGACAGCATCATGGGGGCCTCACCTGTCTTCAATCAGCGGCCCAAGAAGCGCCACAAGAAGATGTGA

Function

symbol description
supt7l Predicted to enable transcription coactivator activity. Predicted to be involved in histone H3 acetylation. Predicted to be part of STAGA complex. Orthologous to human SUPT7L (SPT7 like, STAGA complex subunit gamma).

NR:

description
PREDICTED: STAGA complex 65 subunit gamma

GO: NA

KEGG:

id description
K11316 SUPT7L; STAGA complex 65 subunit gamma

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004077 True 1242 mRNA 0.66 4 32331326 32333781

Neighbor

gene id symbol gene type direction distance location
AMCG00004073 lrfn2,LOC106597048,LOC106582474 coding downstream 763311 31558683 ~ 31568015 (-)
AMCG00004074 NA coding downstream 791919 31537908 ~ 31539407 (-)
AMCG00004072 NA coding downstream 1010732 31319595 ~ 31320594 (-)
AMCG00004070 NA coding downstream 1240019 31076913 ~ 31091307 (-)
AMCG00004069 NA coding downstream 1255653 31067311 ~ 31075673 (-)
AMCG00004076 NA coding upstream 16172 32349953 ~ 32363126 (-)
AMCG00004091 daam2 coding upstream 279315 32613096 ~ 32650701 (-)
AMCG00004090 daam2 coding upstream 329883 32663664 ~ 32671871 (-)
AMCG00004094 NA coding upstream 629259 32963040 ~ 32974811 (-)
AMCG00004095 NA coding upstream 648682 32982463 ~ 32985504 (-)
G5500 NA non-coding downstream 62100 32268705 ~ 32269226 (-)
G5494 NA non-coding downstream 139784 32191320 ~ 32191542 (-)
G5491 NA non-coding downstream 301920 32028953 ~ 32029406 (-)
G5483 NA non-coding downstream 544382 31786334 ~ 31786944 (-)
G5476 NA non-coding downstream 659747 31671363 ~ 31671579 (-)
G5528 NA non-coding upstream 49628 32383409 ~ 32383683 (-)
G5536 NA non-coding upstream 53965 32387746 ~ 32388969 (-)
G5539 NA non-coding upstream 58102 32391883 ~ 32392110 (-)
G5552 NA non-coding upstream 193902 32527683 ~ 32529838 (-)
G5555 NA non-coding upstream 211596 32545377 ~ 32547006 (-)
G5502 NA other downstream 21416 32309480 ~ 32309910 (-)
AMCG00004060 NA other downstream 1357830 30969679 ~ 30973496 (-)
AMCG00004052 NA other downstream 1436502 30813781 ~ 30894824 (-)
AMCG00004041 NA other downstream 2055099 30273806 ~ 30276227 (-)
AMCG00004038 LOC105015767 other downstream 2111191 30184618 ~ 30220135 (-)
G5540 NA other upstream 74021 32407802 ~ 32426563 (-)
G5566 NA other upstream 259846 32593627 ~ 32596407 (-)
AMCG00004102 NA other upstream 1232305 33566086 ~ 33567325 (-)
AMCG00004116 NA other upstream 1541660 33875441 ~ 33918321 (-)
AMCG00004120 NA other upstream 1681587 34015368 ~ 34031547 (-)

Expression


Co-expression Network