AMCG00004078


Basic Information

Item Value
gene id AMCG00004078
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 32305491 ~ 32329172 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004078
ATGAGAGTGCTTCCAAACACAGGTTGGGGCCTGAACCTGAATGGAATCTCCCTTACAGAAAGTCCCTTACTAAGCCCATTAAATGGTCCAAAAACAACTAGCACTCCCAGAAGCACTAATGTGATCAcatccaccaccaccacacaaaAGTCTACCAGCACCCAGACCGGACCTTTGACCACCACAACCCAGACTACAGCTGGGACCAGCTCCACCACTCTCACAGCAGTGGCCGTGCGTCAGGCCTTGACCTGGAAGGAGGCCAGGCTGTACTGCCGCACTCAGCACTCTGACCTGCTGAGCGTCACCGGCCCCGACAGTCAGAGGGCACTGGAGGCTGCCGTCCGCGAGCTGCAGGGCCCCGGGGTGTGGCTGGGCCTGCGTAAGCATTCCCTGTGGGGCCACTGGTACTGGGCTGAGAGCCAGGAGCCACTCAACTACAGCTGCTGGGACCAGGGCCAACCTGACGGACAGATAGGGGAGTTATGTGGGATGGCATCTCTGGACCGCGGTCACAACTACAGATGGAGCGACGAGTGCTGTGAGAAACTGCTGAACTTTGTCTGCTACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004078 True 573 mRNA 0.58 4 32305491 32329172

Neighbor

gene id symbol gene type direction distance location
AMCG00004071 LOC105894840,LOC108443926 coding upstream 934333 31370382 ~ 31371158 (+)
AMCG00004066 NA coding upstream 1242782 31047145 ~ 31062709 (+)
AMCG00004067 NA coding upstream 1265754 31030418 ~ 31039737 (+)
AMCG00004065 NA coding upstream 1315391 30974976 ~ 30990100 (+)
AMCG00004057 NA coding upstream 1336287 30961633 ~ 30969204 (+)
AMCG00004075 NA coding downstream 6220 32335392 ~ 32346595 (+)
AMCG00004080 bre coding downstream 99287 32428459 ~ 32428913 (+)
AMCG00004083 bre,LOC104968080 coding downstream 120235 32449407 ~ 32455846 (+)
AMCG00004081 bre coding downstream 170301 32499473 ~ 32529839 (+)
AMCG00004082 NA coding downstream 229807 32558979 ~ 32559365 (+)
G5499 NA non-coding upstream 36420 32268748 ~ 32269071 (+)
G5493 NA non-coding upstream 113949 32191320 ~ 32191542 (+)
G5490 NA non-coding upstream 276190 32029004 ~ 32029301 (+)
G5482 NA non-coding upstream 518608 31786334 ~ 31786883 (+)
G5417 NA non-coding upstream 1312591 30992606 ~ 30992900 (+)
G5522 NA non-coding downstream 19218 32348390 ~ 32350103 (+)
G5527 NA non-coding downstream 54237 32383409 ~ 32383679 (+)
G5529 NA non-coding downstream 55263 32384435 ~ 32387535 (+)
G5569 NA non-coding downstream 282661 32611833 ~ 32612051 (+)
G5662 NA non-coding downstream 1109156 33438328 ~ 33445420 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 1410664 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 1998316 30296867 ~ 30307175 (+)
G5245 NA other upstream 2033967 30271210 ~ 30271524 (+)
AMCG00004011 ccnc other upstream 2764133 29527414 ~ 29541358 (+)
AMCG00003993 NA other upstream 3621510 28640174 ~ 28683981 (+)
AMCG00004079 NA other downstream 71233 32400405 ~ 32402383 (+)
G5642 NA other downstream 800948 33130120 ~ 33131186 (+)
AMCG00004138 fkbp1b other downstream 2523691 34852863 ~ 34870320 (+)
AMCG00004158 NA other downstream 3423278 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 3698107 36027279 ~ 36045282 (+)

Expression


Co-expression Network