Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004082 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 32558979 ~ 32559365 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0003677 | DNA binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004082 | True | 387 | mRNA | 0.64 | 1 | 32558979 | 32559365 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004081 | bre | coding | upstream | 29140 | 32499473 ~ 32529839 (+) |
| AMCG00004083 | bre,LOC104968080 | coding | upstream | 103133 | 32449407 ~ 32455846 (+) |
| AMCG00004080 | bre | coding | upstream | 130066 | 32428459 ~ 32428913 (+) |
| AMCG00004075 | NA | coding | upstream | 212384 | 32335392 ~ 32346595 (+) |
| AMCG00004078 | NA | coding | upstream | 229807 | 32305491 ~ 32329172 (+) |
| AMCG00004086 | NA | coding | downstream | 12214 | 32571579 ~ 32582699 (+) |
| AMCG00004084 | mocs1 | coding | downstream | 24175 | 32583540 ~ 32596401 (+) |
| AMCG00004085 | NA | coding | downstream | 39088 | 32598453 ~ 32600592 (+) |
| AMCG00004087 | kif6 | coding | downstream | 169295 | 32728660 ~ 32774812 (+) |
| AMCG00004089 | NA | coding | downstream | 255378 | 32814743 ~ 32836681 (+) |
| G5529 | NA | non-coding | upstream | 171444 | 32384435 ~ 32387535 (+) |
| G5527 | NA | non-coding | upstream | 175300 | 32383409 ~ 32383679 (+) |
| G5522 | NA | non-coding | upstream | 208876 | 32348390 ~ 32350103 (+) |
| G5501 | NA | non-coding | upstream | 249067 | 32309505 ~ 32309912 (+) |
| G5499 | NA | non-coding | upstream | 289908 | 32268748 ~ 32269071 (+) |
| G5569 | NA | non-coding | downstream | 52468 | 32611833 ~ 32612051 (+) |
| G5662 | NA | non-coding | downstream | 878963 | 33438328 ~ 33445420 (+) |
| G5680 | NA | non-coding | downstream | 913671 | 33473036 ~ 33473330 (+) |
| G5681 | NA | non-coding | downstream | 915477 | 33474842 ~ 33475047 (+) |
| G5688 | NA | non-coding | downstream | 1006808 | 33566173 ~ 33567479 (+) |
| AMCG00004079 | NA | other | upstream | 156596 | 32400405 ~ 32402383 (+) |
| AMCG00004056 | ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 | other | upstream | 1664152 | 30887995 ~ 30894827 (+) |
| AMCG00004039 | NA | other | upstream | 2251804 | 30296867 ~ 30307175 (+) |
| G5245 | NA | other | upstream | 2287455 | 30271210 ~ 30271524 (+) |
| AMCG00004011 | ccnc | other | upstream | 3017621 | 29527414 ~ 29541358 (+) |
| G5642 | NA | other | downstream | 570755 | 33130120 ~ 33131186 (+) |
| AMCG00004138 | fkbp1b | other | downstream | 2293498 | 34852863 ~ 34870320 (+) |
| AMCG00004158 | NA | other | downstream | 3193085 | 35752450 ~ 35766180 (+) |
| AMCG00004160 | LOC106571404,LOC106607809,LOC105897019 | other | downstream | 3467914 | 36027279 ~ 36045282 (+) |
| AMCG00004167 | NA | other | downstream | 3702423 | 36261788 ~ 36278234 (+) |
