Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004088 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 32838964 ~ 32844650 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006811 | ion transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004088 | True | 567 | mRNA | 0.47 | 4 | 32838964 | 32844650 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004089 | NA | coding | upstream | 2283 | 32814743 ~ 32836681 (+) |
| AMCG00004087 | kif6 | coding | upstream | 64152 | 32728660 ~ 32774812 (+) |
| AMCG00004085 | NA | coding | upstream | 238372 | 32598453 ~ 32600592 (+) |
| AMCG00004084 | mocs1 | coding | upstream | 242563 | 32583540 ~ 32596401 (+) |
| AMCG00004086 | NA | coding | upstream | 256265 | 32571579 ~ 32582699 (+) |
| AMCG00004093 | NA | coding | downstream | 32160 | 32876810 ~ 32900670 (+) |
| AMCG00004092 | gnmt,LOC107748599,LOC107566124 | coding | downstream | 92755 | 32937405 ~ 32946916 (+) |
| AMCG00004099 | NA | coding | downstream | 287705 | 33132355 ~ 33135491 (+) |
| AMCG00004101 | NA | coding | downstream | 292986 | 33137636 ~ 33142538 (+) |
| AMCG00004100 | osr1 | coding | downstream | 396382 | 33241032 ~ 33247564 (+) |
| G5569 | NA | non-coding | upstream | 226913 | 32611833 ~ 32612051 (+) |
| G5529 | NA | non-coding | upstream | 451429 | 32384435 ~ 32387535 (+) |
| G5527 | NA | non-coding | upstream | 455285 | 32383409 ~ 32383679 (+) |
| G5522 | NA | non-coding | upstream | 488861 | 32348390 ~ 32350103 (+) |
| G5501 | NA | non-coding | upstream | 529052 | 32309505 ~ 32309912 (+) |
| G5662 | NA | non-coding | downstream | 593678 | 33438328 ~ 33445420 (+) |
| G5680 | NA | non-coding | downstream | 628386 | 33473036 ~ 33473330 (+) |
| G5681 | NA | non-coding | downstream | 630192 | 33474842 ~ 33475047 (+) |
| G5688 | NA | non-coding | downstream | 721523 | 33566173 ~ 33567479 (+) |
| G5707 | NA | non-coding | downstream | 753242 | 33597892 ~ 33600011 (+) |
| AMCG00004079 | NA | other | upstream | 436581 | 32400405 ~ 32402383 (+) |
| AMCG00004056 | ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 | other | upstream | 1944137 | 30887995 ~ 30894827 (+) |
| AMCG00004039 | NA | other | upstream | 2531789 | 30296867 ~ 30307175 (+) |
| G5245 | NA | other | upstream | 2567440 | 30271210 ~ 30271524 (+) |
| AMCG00004011 | ccnc | other | upstream | 3297606 | 29527414 ~ 29541358 (+) |
| G5642 | NA | other | downstream | 285470 | 33130120 ~ 33131186 (+) |
| AMCG00004138 | fkbp1b | other | downstream | 2008213 | 34852863 ~ 34870320 (+) |
| AMCG00004158 | NA | other | downstream | 2907800 | 35752450 ~ 35766180 (+) |
| AMCG00004160 | LOC106571404,LOC106607809,LOC105897019 | other | downstream | 3182629 | 36027279 ~ 36045282 (+) |
| AMCG00004167 | NA | other | downstream | 3417138 | 36261788 ~ 36278234 (+) |
