AMCG00004094


Basic Information

Item Value
gene id AMCG00004094
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 32963040 ~ 32974811 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004094
GTGATTCTAAGACTGTCAGTTTGTTCTGCACACATCCAGAGGACTTCTACCTTTCACTGCCAGATTTTCTACTTCTAACAGCTTCTGAACACATTCTGTACAATATCCTGCTCAGCCAAGAACAATCGCAATGAGTGAGACaaaagtatttaCAACCTCTTGCATTGACCTGGAAAGCTTTGTGTCAGCGAAAGCAGAACTGAGCAGGGGAGGCCTACTGGATTCTGTCCTTAAGTGCAATCTGGAGTATGCCATGGAGGCGCTGGATGCCATGCCAGTCATCAAGAGGACCAATGTCTCCCTGCTGATTGAAGGCGACCAGCAACTGATGAAGTTCACCTGTGACAACCCTGTGATCCACTACACTGTGAAACTAGTGAGGAACATCCCAGAACTGCAGCAGAAGGTCTATGTTTGGAACAAGCTGATGCCGTCTAATGTGGAGGCTTTCCACTTTTCAGGGCACCATTGCCAGGATGAGTTTGAGCCCTGCCATAAGCAAGCTCTGAAGGCTGTGACAGAGAAAGGATTGGTCAACACAGCACTGGAAATCATCTGCAATGACTTCCACCTCACCTACAGCACCCTTCAGCCAGACAGCACTGTCACTGTGAAGACCAAATGCAGGATCAATCTGGGCCACTTGTTGTCCTTGCAGAAAATCCTGGAGGTGAAGACCGAGATGGAGCAGAAGAAGATCATGGGCAAAGGTCTTCTGGCCTGCTTCCAACACCTGCTGGTGCACTACACACAATATAAAGAATCAAATGTCAAACTCATCCTTCAAAGCGAGGGGCAAATCATAGAGTTAATCAGAGGCAAACATGACTGTCTGGATGTGGAGTATTATATCTTCGTCAATGCCAAAAATGAAACCCAGAGCCAACGTGTCGACTTGTATCAGCCTTGGGCTTATGATTAGGAGAAATACTTCACCCTAAAAGCTCCTGAAACCTGTATAGCACTTCTAGTGAGTGTTTCCTCTCACTTTTATGTTAGTCGGCATCAAATCAACTAATATTCACTGTCTGATCAACAATTAAACTGCTCTTACTGAAAAGGCACTTTTAATCTAATGgacacattgaaataaaaaggtttaatCCTGCAGCAATAATTACACGAATTACACAATGCCACTAGACTGAATTTAAAGGAAAGCctaaaataattgcaatatgAAATAACTCAATTTCAAAATAGGTGTTTTTAAACTAATAGAAAaccattttttggtttgtttaattggCGAATCAAtgagatatataaatattgtaattccAAGGACAGTGTGAAAAAGAGGATGGCTcgtattaagaaaaaaaacttgaatttcCATATAATTCCAAGAATGTACTTTCCCTGAACACAACAACATGTGCCATGAAATCAAATTATTCCCTGAATCCTGGAATAGAGGGTTATTAGTGTTGATAAGTGTAAACAAGACAATTAGGTCAGGGACATTGGATTACAATTATGAAGAAGAATATGTCAGGGATGTACATCACAAAGCTTCTCATGTGGATTTTGCCTCTGCTGACAGTGTTGATTGATGCAACAACATACTGTCACTGTTCTTATTCTTACAGCACCTGCTCAGCATGCACACGCTGGCACCACTGTTACATATTCCACAAGCTGTTTCTCGGTTTCCCATTGACTCTTTGAAATTATACTGATCTCTCTCCTGTGGCAGGATACCTAATATGTGTCAGTCTTTCAgagcaaattattatttgtttcagcCCACAACCTCAACTGCTCACAGCAATCCATAGCAAACCCcaagaacaggaaaaaaaaacagcaagccTTCAACTTCTATTTGCTTAAGTGTAATACCCTTATGGTGCAGAAGAAACATGTCCAAATGTTGTATTGACTTCCCAGTTGGAAAAAAGTACTGTAATGTAAAGTTTACCGgatttttcaatgttttattcattgtaGTAATGTTATGATAAAGAACCAATTTTCGGTAGATGTATCTGTTATTGTAATGATTGTCTAATTGTAAAAAATCTACATTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004094 True 2036 mRNA 0.40 3 32963040 32974811

Neighbor

gene id symbol gene type direction distance location
AMCG00004090 daam2 coding downstream 291169 32663664 ~ 32671871 (-)
AMCG00004091 daam2 coding downstream 312339 32613096 ~ 32650701 (-)
AMCG00004076 NA coding downstream 599914 32349953 ~ 32363126 (-)
AMCG00004077 supt7l,LOC107656753,LOC107726086,LOC107553729,LOC107737450,LOC107697525 coding downstream 629259 32331326 ~ 32333781 (-)
AMCG00004073 lrfn2,LOC106597048,LOC106582474 coding downstream 1395025 31558683 ~ 31568015 (-)
AMCG00004095 NA coding upstream 7652 32982463 ~ 32985504 (-)
AMCG00004096 syt14,syt14a,LOC101484328,LOC107548616 coding upstream 39717 33014528 ~ 33022148 (-)
AMCG00004098 NA coding upstream 76326 33051137 ~ 33106380 (-)
AMCG00004097 LOC104948289,LOC107579370 coding upstream 147781 33122592 ~ 33132313 (-)
AMCG00004103 NA coding upstream 579599 33554410 ~ 33556854 (-)
G5570 NA non-coding downstream 351696 32604888 ~ 32611344 (-)
G5555 NA non-coding downstream 416034 32545377 ~ 32547006 (-)
G5552 NA non-coding downstream 433202 32527683 ~ 32529838 (-)
G5539 NA non-coding downstream 570930 32391883 ~ 32392110 (-)
G5536 NA non-coding downstream 574071 32387746 ~ 32388969 (-)
G5645 NA non-coding upstream 129914 33104725 ~ 33105215 (-)
G5721 NA non-coding upstream 651498 33626309 ~ 33627507 (-)
G5805 NA non-coding upstream 1317458 34292269 ~ 34292496 (-)
G5869 NA non-coding upstream 1897802 34872613 ~ 34897907 (-)
G5870 NA non-coding upstream 1902689 34877500 ~ 34878219 (-)
G5566 NA other downstream 366633 32593627 ~ 32596407 (-)
G5540 NA other downstream 536477 32407802 ~ 32426563 (-)
G5502 NA other downstream 653130 32309480 ~ 32309910 (-)
AMCG00004060 NA other downstream 1989544 30969679 ~ 30973496 (-)
AMCG00004052 NA other downstream 2068216 30813781 ~ 30894824 (-)
AMCG00004102 NA other upstream 591275 33566086 ~ 33567325 (-)
AMCG00004116 NA other upstream 900630 33875441 ~ 33918321 (-)
AMCG00004120 NA other upstream 1040557 34015368 ~ 34031547 (-)
G5801 NA other upstream 1157287 34132098 ~ 34135600 (-)
G5871 NA other upstream 1917090 34891901 ~ 34892613 (-)

Expression


Co-expression Network