Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004118 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 33928514 ~ 33939125 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004118 | True | 333 | mRNA | 0.43 | 4 | 33928514 | 33939125 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004117 | hs1bp3 | coding | downstream | 29509 | 33896046 ~ 33899005 (-) |
| AMCG00004114 | NA | coding | downstream | 152317 | 33775289 ~ 33776197 (-) |
| AMCG00004111 | LOC106607566 | coding | downstream | 196321 | 33712657 ~ 33732193 (-) |
| AMCG00004112 | NA | coding | downstream | 238548 | 33687954 ~ 33689966 (-) |
| AMCG00004104 | NA | coding | downstream | 282802 | 33632974 ~ 33645712 (-) |
| AMCG00004119 | NA | coding | upstream | 10842 | 33949967 ~ 33968657 (-) |
| AMCG00004123 | NA | coding | upstream | 139054 | 34078179 ~ 34130995 (-) |
| AMCG00004129 | NA | coding | upstream | 781239 | 34720364 ~ 34738000 (-) |
| AMCG00004131 | LOC107603081,LOC107742719 | coding | upstream | 833375 | 34772500 ~ 34794138 (-) |
| AMCG00004130 | NA | coding | upstream | 897298 | 34836423 ~ 34849187 (-) |
| G5721 | NA | non-coding | downstream | 301007 | 33626309 ~ 33627507 (-) |
| G5645 | NA | non-coding | downstream | 823299 | 33104725 ~ 33105215 (-) |
| G5570 | NA | non-coding | downstream | 1317170 | 32604888 ~ 32611344 (-) |
| G5555 | NA | non-coding | downstream | 1381508 | 32545377 ~ 32547006 (-) |
| G5552 | NA | non-coding | downstream | 1398676 | 32527683 ~ 32529838 (-) |
| G5805 | NA | non-coding | upstream | 353144 | 34292269 ~ 34292496 (-) |
| G5869 | NA | non-coding | upstream | 933488 | 34872613 ~ 34897907 (-) |
| G5870 | NA | non-coding | upstream | 938375 | 34877500 ~ 34878219 (-) |
| G5929 | mut | non-coding | upstream | 964241 | 34903366 ~ 34906973 (-) |
| G6009 | NA | non-coding | upstream | 1533743 | 35472868 ~ 35475341 (-) |
| AMCG00004116 | NA | other | downstream | 10193 | 33875441 ~ 33918321 (-) |
| AMCG00004102 | NA | other | downstream | 361189 | 33566086 ~ 33567325 (-) |
| G5566 | NA | other | downstream | 1332107 | 32593627 ~ 32596407 (-) |
| G5540 | NA | other | downstream | 1501951 | 32407802 ~ 32426563 (-) |
| G5502 | NA | other | downstream | 1618604 | 32309480 ~ 32309910 (-) |
| AMCG00004120 | NA | other | upstream | 76243 | 34015368 ~ 34031547 (-) |
| G5801 | NA | other | upstream | 192973 | 34132098 ~ 34135600 (-) |
| G5871 | NA | other | upstream | 952776 | 34891901 ~ 34892613 (-) |
| AMCG00004132 | NA | other | upstream | 1015581 | 34954706 ~ 34963885 (-) |
| AMCG00004143 | mut,LOC107726528,LOC107697172,LOC107726757 | other | upstream | 1405538 | 35344663 ~ 35414446 (-) |
