Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004125 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 34631221 ~ 34638669 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004125 | True | 723 | mRNA | 0.56 | 3 | 34631221 | 34638669 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004122 | NA | coding | upstream | 497609 | 34131126 ~ 34133612 (+) |
| AMCG00004121 | NA | coding | upstream | 501198 | 34119571 ~ 34130023 (+) |
| AMCG00004115 | NA | coding | upstream | 718336 | 33905291 ~ 33912885 (+) |
| AMCG00004113 | rhob,LOC105888539,LOC103025336,LOC105907285,LOC106607565 | coding | upstream | 863585 | 33767046 ~ 33767636 (+) |
| AMCG00004110 | NA | coding | upstream | 869764 | 33747909 ~ 33761457 (+) |
| AMCG00004124 | klhl29,LOC107738561,LOC107678777 | coding | downstream | 27723 | 34666392 ~ 34685790 (+) |
| AMCG00004126 | klhl29,LOC107742703 | coding | downstream | 56734 | 34695403 ~ 34724610 (+) |
| AMCG00004127 | NA | coding | downstream | 159720 | 34798389 ~ 34808422 (+) |
| AMCG00004128 | NA | coding | downstream | 181499 | 34820168 ~ 34834115 (+) |
| AMCG00004137 | cdc5l,LOC107594083,LOC106599718 | coding | downstream | 325797 | 34964466 ~ 34977633 (+) |
| G5808 | NA | non-coding | upstream | 249122 | 34381868 ~ 34382099 (+) |
| G5804 | NA | non-coding | upstream | 338720 | 34292271 ~ 34292501 (+) |
| G5788 | NA | non-coding | upstream | 541099 | 34081826 ~ 34090122 (+) |
| G5787 | NA | non-coding | upstream | 550436 | 34078351 ~ 34080785 (+) |
| G5768 | NA | non-coding | upstream | 738078 | 33892474 ~ 33893143 (+) |
| G5867 | NA | non-coding | downstream | 255433 | 34894102 ~ 34895661 (+) |
| G5875 | NA | non-coding | downstream | 260967 | 34899636 ~ 35350027 (+) |
| G5914 | NA | non-coding | downstream | 662434 | 35301103 ~ 35306949 (+) |
| G6002 | NA | non-coding | downstream | 817007 | 35455676 ~ 35455887 (+) |
| G6007 | NA | non-coding | downstream | 827193 | 35465862 ~ 35466655 (+) |
| G5642 | NA | other | upstream | 1500035 | 33130120 ~ 33131186 (+) |
| AMCG00004079 | NA | other | upstream | 2228838 | 32400405 ~ 32402383 (+) |
| AMCG00004056 | ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 | other | upstream | 3736394 | 30887995 ~ 30894827 (+) |
| AMCG00004039 | NA | other | upstream | 4324046 | 30296867 ~ 30307175 (+) |
| G5245 | NA | other | upstream | 4359697 | 30271210 ~ 30271524 (+) |
| AMCG00004138 | fkbp1b | other | downstream | 214194 | 34852863 ~ 34870320 (+) |
| AMCG00004158 | NA | other | downstream | 1113781 | 35752450 ~ 35766180 (+) |
| AMCG00004160 | LOC106571404,LOC106607809,LOC105897019 | other | downstream | 1388610 | 36027279 ~ 36045282 (+) |
| AMCG00004167 | NA | other | downstream | 1623119 | 36261788 ~ 36278234 (+) |
| AMCG00004179 | ptrhd1,LOC103399259 | other | downstream | 2048961 | 36687630 ~ 36697885 (+) |
