AMCG00004127


Basic Information

Item Value
gene id AMCG00004127
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 34798389 ~ 34808422 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004127
GTCCCAGACAGCTGTGACGTCACGGGCGCAGCAGCGGGCGGCGAGAGGGATCGGCTGTGCGCGAGCAATGCTAGAAACTTCCCGGCGCGGCGCGACTGTGTGGAAAAGACAACTGATGGAATAGAAGACAGTatgaaaaacatcaataacacaGAAGAGAACAGCAAAGACAGAGAATGGGGCAGCGGTGCGGAGAGCTGTGAGGAGGAGGCTCCCATTAGCAGGAGCTTTTCTGTGGAAGACCTGCTCGATGAGGTTGAGAAGATTGGCACAGTCTCTGCTGGGGACCAAAAGGCAGAGCTTGTGGTGAAGCTGTGGAAGGATGGTTTCACCGTGAATGATGAGGGGCTGAGGAACTACACTGACGAGGAAAACCAGCAGTTCCTGGAGTCAATCAAGAGAGGGCAAGTTACTGTGGAGCTGCCACTGGAGTTTGAAAGAGTATGTATGGCTGAGGAGCTGGAGGTGAAGGTAGAAGACTTGAAAGAAGAAATGTACAAGCCAAGGAGAAAGACATTTCACCCTTTCACTGGCAGAGGATACAGGCTGGGAAGCGTTGCTCCCAAAGTGATAACAAAGTCTTTGCAGAGCCAGGAGGACAGTGAGGGCCTTCCGATCCCATCAGTGGAGCTCAGTGATGTCCAGCCGGTCACCAGCCTCCAGATCTGGCTGGCAGATGGAAGGAGACTAGTGCAGAAATTTAACCTCTCTCACAGGATTAGTGATGTCCGGGAATTCATAGAGAGATCTCATGGAACAGACTTACCCTTCATCCTCACAACGTCGCTGCCGCTCCGGGAGCTCACAGAGGACAACTGCAGCCTGCTGGAGGCAGACCTGTCAAATGCAGTGATTGTGCAGAGGCCTGTGAAAGCTGAAGCCCCCTTTGGCCAGTCTTGATGGGAGACCTCCATTTTCCTCAAGAGACCACACTTCTAGAACACTGTAAAACAACAGATGtcttaagaagaaaaacatatatattaagtaattaaaacaaagctcATCCTCCAATTGTAGTAGAGATACAGTGCATTCACATTTCCCTCccaaaatacaatgcattagcTGATTTCAATACTTCCCAACATTTTGTTGGGCCCCTGGCCCAATTCGGTGCCATCTGGCCAAAGAAATGCatgaaagttaaaacaaaattcaCAAAAACTACAGGgttacagaaatgaaaaaaaagtgtgtaaaatgtaatgtaatacaatgcaaGAAGCggagaataaaatgtacaagtGGTCTGGCTCTTGCTCTGCCCCCTTGCTCTAACCTCCATTCTCCCACCCCTCTCTACCAGTTTTCGATCTCACCCCCCacctctcactctccctcccgTCATCCCCCATGTCTCCCCATCAACAGATTAGAAACAGACTGCCATGCCTACAGTATGTAATTTACTGGGGGAAACACTGGACTGTAATACTTTAATAGCAACCAGTAATTTTACATTGTGACAAACGCAGGATACTTTTCCAAGCTCTGTGTTTATAATAGTATGTATGGAAAGCTCCACACAGCATTAGGACAGAGGCTACCATAGTTACAAAACGTGGTTCGGTGAAAGTTGAAAAATCACTGAAGTCAcgttatttgtatatttaccaATACTGAAGAAGAATTACA

Function

GO: NA

KEGG:

id description
K24349 UBXN2A; UBX domain-containing protein 2A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004127 True 1638 mRNA 0.47 7 34798389 34808422

Neighbor

gene id symbol gene type direction distance location
AMCG00004126 klhl29,LOC107742703 coding upstream 73779 34695403 ~ 34724610 (+)
AMCG00004124 klhl29,LOC107738561,LOC107678777 coding upstream 112599 34666392 ~ 34685790 (+)
AMCG00004125 NA coding upstream 159720 34631221 ~ 34638669 (+)
AMCG00004122 NA coding upstream 664777 34131126 ~ 34133612 (+)
AMCG00004121 NA coding upstream 668366 34119571 ~ 34130023 (+)
AMCG00004128 NA coding downstream 11746 34820168 ~ 34834115 (+)
AMCG00004137 cdc5l,LOC107594083,LOC106599718 coding downstream 156044 34964466 ~ 34977633 (+)
AMCG00004139 NA coding downstream 364054 35172476 ~ 35173032 (+)
AMCG00004140 runx2,LOC107378134,LOC102312376 coding downstream 399109 35207531 ~ 35210874 (+)
AMCG00004141 LOC107717234,LOC107594081,LOC107552040,LOC107653853 coding downstream 430810 35239232 ~ 35248925 (+)
G5808 NA non-coding upstream 416290 34381868 ~ 34382099 (+)
G5804 NA non-coding upstream 505888 34292271 ~ 34292501 (+)
G5788 NA non-coding upstream 708267 34081826 ~ 34090122 (+)
G5787 NA non-coding upstream 717604 34078351 ~ 34080785 (+)
G5768 NA non-coding upstream 905246 33892474 ~ 33893143 (+)
G5867 NA non-coding downstream 85680 34894102 ~ 34895661 (+)
G5875 NA non-coding downstream 91214 34899636 ~ 35350027 (+)
G5914 NA non-coding downstream 492681 35301103 ~ 35306949 (+)
G6002 NA non-coding downstream 647254 35455676 ~ 35455887 (+)
G6007 NA non-coding downstream 657440 35465862 ~ 35466655 (+)
G5642 NA other upstream 1667203 33130120 ~ 33131186 (+)
AMCG00004079 NA other upstream 2396006 32400405 ~ 32402383 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 3903562 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 4491214 30296867 ~ 30307175 (+)
G5245 NA other upstream 4526865 30271210 ~ 30271524 (+)
AMCG00004138 fkbp1b other downstream 44441 34852863 ~ 34870320 (+)
AMCG00004158 NA other downstream 944028 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 1218857 36027279 ~ 36045282 (+)
AMCG00004167 NA other downstream 1453366 36261788 ~ 36278234 (+)
AMCG00004179 ptrhd1,LOC103399259 other downstream 1879208 36687630 ~ 36697885 (+)

Expression


Co-expression Network