AMCG00004139


Basic Information

Item Value
gene id AMCG00004139
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 35172476 ~ 35173032 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004139
ATGTCACAACCACATGACCCAGCCTCTCCAGTAACAGCacatgaaggaaaaaaagagagttTTAAAGCTTATGCCTTTTTGGATTGTGTGAATGCTTCATTCGCCTCACAAACAACCACAGAACCACAAGTGCGGTGCAAATTTTCTCCAGGACGACAGAAGCAGCCTCTGGTGCGTAAATGGTTAATCTCCGCAGGTCACTTCCAGTCACAGAGACCGACCAAtttagGACTTCGAGGGTCATTGAAACCACAAAAGGACAAGAatctttcagaaaataatcaagAGTGGCTATGGCATCTAACAGTCTATTCAGTTCTGTCACACCATGTCAGCAAAACTTTTTCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004139 True 351 mRNA 0.44 2 35172476 35173032

Neighbor

gene id symbol gene type direction distance location
AMCG00004137 cdc5l,LOC107594083,LOC106599718 coding upstream 194843 34964466 ~ 34977633 (+)
AMCG00004128 NA coding upstream 338361 34820168 ~ 34834115 (+)
AMCG00004127 NA coding upstream 364054 34798389 ~ 34808422 (+)
AMCG00004126 klhl29,LOC107742703 coding upstream 447866 34695403 ~ 34724610 (+)
AMCG00004124 klhl29,LOC107738561,LOC107678777 coding upstream 486686 34666392 ~ 34685790 (+)
AMCG00004140 runx2,LOC107378134,LOC102312376 coding downstream 34499 35207531 ~ 35210874 (+)
AMCG00004141 LOC107717234,LOC107594081,LOC107552040,LOC107653853 coding downstream 66200 35239232 ~ 35248925 (+)
AMCG00004149 NA coding downstream 184390 35357422 ~ 35359998 (+)
AMCG00004145 NA coding downstream 225348 35398380 ~ 35406953 (+)
AMCG00004150 NA coding downstream 278039 35451071 ~ 35455522 (+)
G5867 NA non-coding upstream 276815 34894102 ~ 34895661 (+)
G5808 NA non-coding upstream 790377 34381868 ~ 34382099 (+)
G5804 NA non-coding upstream 879975 34292271 ~ 34292501 (+)
G5788 NA non-coding upstream 1082354 34081826 ~ 34090122 (+)
G5787 NA non-coding upstream 1091691 34078351 ~ 34080785 (+)
G5914 NA non-coding downstream 128071 35301103 ~ 35306949 (+)
G6002 NA non-coding downstream 282644 35455676 ~ 35455887 (+)
G6007 NA non-coding downstream 292830 35465862 ~ 35466655 (+)
G6067 NA non-coding downstream 647223 35820255 ~ 35820483 (+)
G6102 NA non-coding downstream 988574 36161606 ~ 36165870 (+)
AMCG00004138 fkbp1b other upstream 302156 34852863 ~ 34870320 (+)
G5642 NA other upstream 2041290 33130120 ~ 33131186 (+)
AMCG00004079 NA other upstream 2770093 32400405 ~ 32402383 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 4277649 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 4865301 30296867 ~ 30307175 (+)
AMCG00004158 NA other downstream 579418 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 854247 36027279 ~ 36045282 (+)
AMCG00004167 NA other downstream 1088756 36261788 ~ 36278234 (+)
AMCG00004179 ptrhd1,LOC103399259 other downstream 1514598 36687630 ~ 36697885 (+)
G6314 NA other downstream 1600969 36774001 ~ 36774523 (+)

Expression


Co-expression Network