AMCG00004145


Basic Information

Item Value
gene id AMCG00004145
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 35398380 ~ 35406953 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004145
GAAAAGCCGTGGTGAGAAAGTTGTTACAATCTTGTTGTTTTAAGTATTAACCGGTTCTGCCAGACTTCCATTTTGAAGTTATTGTCGTCGCAGTGGTTAAGACGGGTCAAAGTTTCAATAAAGCTGTCGGGCTGACTGGTACGGTGCTGTGTTTCCGTGACCTCGGCTGTGTCGAGCCACTGCTTCCTGATCATACCTCCGCTGGTTCAATCGCATAAGAAGGACCCCTCTGAAATAGGAGCACACATTGCAAAATGTGGCTGAGCTGCTTTTTGTTGGCCTTTGTGGTTTGGTGTGGACTGGGCATTTGCGACGACGCAGGGAATGGCACCGCTTTCCTGAACCGCTCCACTGAGCCACTACTGCTGGTCTCTTTCGATGGCTTCAGGGCGGACTACCTGAAGAACTATAGCTTCCCCAACCTGAAgaagtttttcttttcagatggCGTTCTTGTGGAGCACCTCACCAATGTCTTCATCACCAAGACCTTCCCCAATCATTACAGCATTGTCACCGGCCTTTATGCTGAAAGCCACGGGATGGTGGCCAGCAAAATGTATGACCCGATAACAAAGACGAAATTCTCGATCGCGAATGACACGGACCCCTTTTGGTGGAATGAGGCCACACCTATATGGCTATCGACACAGAAGGCGGGTTACAAGACCGCCACGGCCATGTGGCCTGGGACTGACATACGGATTCACAACAGGACGTCGACATACTACCTGCACTACAATCCCAATGTTACGTTTCAGGAGAGAGTGGGAAATCTCACCAAGCACCTGAGTGAGGAGGAGGCTGTGAGGTTTGCCGCGCTGTACTGGGAAGAGCCCGACTATTCGGGCCACAAGTATGGGCCCGACAACACCACCCAGATGGCCAAGGTTTTGAAAGAGGTCGATGATCACATCGGTTTCCTTGTTGACAAGCTGAATAAGTCAGGGCTGTGGggcaaaattaatgtaattataaccAGCGACCATGGGATGACCCAGTGTTCCCAGGACAGACTTATAAAGCTTGACCAATGTATTGGAGAGAAAAATTACACCCTGGTGGATCTCAGTCCTGTGACTGCTGTCATACCAGTGACAAACTCTACATATGTCTACAACATACTGAAGAATTGCCACCCCAACATGAAAGCTTACATGAAAGCTGAAATTCCCGATAGGCTGCATTACAGGAACAACGAACGGATCCAGCCAATCATTCTTGTTGCAGACGAGGGATGGACAATAGTTAAGAACGGACCGCTTCCACGGTTGGGTGACCACGGCTATGATAATGCATTACCCAGCATGCATCCCTTCCTAGCTGCCTATGGCCCTGCCTTCAGGAAGGGCTACCGGATGACCAGCTTCAACAGTGTGGACATTTACCCTCTAATGTGCCGTCTGCTGGGAATAGAGGAGATGCCCAACAACGGCAGCTTTGTTAATGCCCGCTGTCTGCTTGTCAGTGAGAAGTGCATCAATCTCCCTGAAGTGATTGGGTTAGTAATTGGGGTGTTGATGGTCCTGACCACTCTGACGTGCCTGTTCATTCTGATGAAGAACCGAGTGCCATCGGCTTCTCGCCCATTCGCTCGCCTCGAGCTGCAGGATGATGACGATGATCCACTGATTAGCTAGATGGATGTGTTTCAGAGCCGATGTGAAGCTGCTGCATTTGGCAATATCGCGATACAGTACAAGCGTTCTAGTGCACAGTGAATTTAACCCACCTGCAACCGAATGTGAAGGGCTTCTTTCAAATCTTAGTCCCAATCTGAGCTGTATTTATGCTGTCTGCTCTTAATTTAAGAGTGCATGGAGGTGGTATGACCATTTTGCACTTTCACAGTAGACTTCTGCCACTGTAAGTTCCCAACACGTACAAACTCATCCTCAAGGCTCCGTTTTCTGTCTGTCGACCATCGATCATGCCTGATATTTGAAGTTTAAGACTTGGACGGCTTGCAGTTTCTTACTGTACATCGCAGTTCACATTGTTGCATTTAATGGATCCAATCGTTAAGGATGcaattgtaatgtttaaatttgtaaataCTGCAATTGTCTGAGTGGATATAATTTGAGATTCCGCAAACTTTGTTCACTATCTGCTGTGggatttatttcaaatgatgcGTGTTTGGCAAAATTTTAACTACATTTCAAATTAGATGAATAATTGCGTACCCAATTGACTATGCATCTTTCTTAAAATTACAGGTTTATGCAAATAAGGACAAAAGCCCAGTTGCCTTCCCTGTTGAGTAACTAACTGAAGTTCTGTTAATTTAATTGGGAACCACCAGCAGCTTAGTAGGCAAACCCAGCACAGGACCCATGAAATAGAGAATAAGATAGTTTTTACCTCTTGAGGTGAGAGCCTAGAGTATGGAAGCAGGAGAGCAGAAAGAAATGTTTAGATGTATGGATTGTGAAGAGGCATGTTGAAAAGTGTATTGTAATGGTCAAGAATGTCCACAGCAGTCTCCTTACTAGCCCACACATATACATCAAGAAGCCCATTCGCTCAAAAGCCCATGAAAGGCATCTGAATTTACTTGAATTCTTTGTAGAAATGTAGGTTATCTAACAGCTGTCATTTCTAGCAAGTctgcttttgtatttataattttcctCTTATTTCTTATACTTCCAAGTCAATATTGTGAAAGTGGTTTTCCAGTACGTTGACTAGGTCAGGGAAGTTACATTTTAGAAATCACTCCTAATGCACAAATGGCTTGTGTTCTTGGAGGATCTCATCGCTTCGGTGCAATTTGGTTTGTTGAAATATTCCCTTTAGTCACCGGTTGTAAATGTATCATTGATTGGACAGTCTGCAATGTGATGTACAtttctattgtttatttttatatggagTTATGCTGGGCTATGGGTTACGTACTATAGGTCAGCCCAGAGCTCTCTTGCACATTGCTGTGGTATACAGCTGAATATTTATACTTCGGGAGATCTTAAAATCCTGCAACCCTAAATTGGAAATAATGCACAGCGACGCTAATGCAGTAGCTGCTGCTGCCTGGCTTTGAAGGACTAGCAATTGCATTACTACCAGAAAGGAAGCAATACAGCCAATGTAACTCATGTTTGCTAGCATCTTCttgaacacaacacaacaattgGCCATTTTGCTACAAGTACTGGGAAATCTCCTTCCAAAGCTTtagtatattttcttttaattttctaCCTTGCAAAGGGCACTgttctttatatataatgtgtacatATGGAATTTGGTTTGCTGCTCGATTTGACTTTTCTACTTTGGCACTGATAGATTTTAATAGCATGGTTTATAATGGTCTTATGTTGATGTGAGAACTGtaggaattcaaaatataaaatgtgttcagGCCTCTAAATGTGAACTCCCATGAGTTTTATAtgaatgttttcttatttaataaaatctcCATTTTATGAATCCGTTTCTTCCAGAAAGTGCACATTGCGTGTGCAACACAGATAAATGTACTGaagagctttatttatttttattcactgaggtacaaagttttgttttggctgtattttcaatttaaaaatagtaatttgCTTTAGTCAGACTGAACAGGTTAATTCTAGTATATTACTCCTACCATTCTGCCTTAAATTCATACTTCATAGCAGATAAAAGCTTCTAATGTGTGTTCCCCTTAATCCTTGTTGGTTATGTattctttgtaaatattttgtgtgtaaaatCACTTCTCCTGTAATGGTTTTGGTATTGTGCACGATTTCACTTTATTCAGTACCTTCCTGGGGTTGAAAATCAATTTGAATggattttgttaaattatatcaaatatacGGTGTACAATGTTTCAGGCAGTATGACTTTCATATGCTAATTGTGAAGGATAAAGAGTTAATTTGTACATTGTGTACTATGTACAGAGCACATCTAGCACCTGATATGGGGGGGGAAGTAATGACAGATTGGTGTGGATATAATGGCATGATTGTGCTGACATGGGACCTTTTGCTTGGCTAGCATCCGTGTTTCACCATGTGGACACTGATTTGCCCATTTTCAGGATTATGGAACATATGGATATGATTCTGCTGCCTGATGCATAAATCAACATGTAACATGAACCTGTCAAATGTACTGTagttctttattttctatatgcCCTCCCTTACatagagaaatacaaattagaaCAATGAATTATGTTATGTTTGTTTCCTCTTACATGTAGCATTAAACGGTagaaccccccacacacacacacacaattttaaatccTCCTAAACATGGATAACTGCTAAATTGTggttttaaccattttaatttgcttatgtaaatatagtatttttattatttctttcatcTGTTGCTATGCATTACATCTTTCATTTGATCTGGTGTTGCTTGCAAAAATGTGTACACCATGTGAAGAACATGggatattgtttgtgtgttcttGGTTTTCATGACTGTtagtaattgcattttatttttattcatgtatacaTTGTgtgatcattatttaaattatttgtgtcCCTGACCCCAGGGATTTTATGTATTCCTGAAGTCATTAACCCTTAGAAACCCCCCTGTGACATGTTTGTATAAATtgggataatatatttttgtcaggcctgttaaatgtttgtgactTATGCATCGCACTGGGTCCTTAGGGGTTaatgttactgtattttaagAGTGCTTGCTTATGGAGGAATAAAACAAGGGTTGCGTTTGTTGCTGGCTTTGTGGTGAATAAAGGTACTGCTGTTTATAAACTTGTAATATGACACTGCTTTTGATTCATTGGTAGAGGTTAAGGGCCATCTATCAGTCGGTTTAAAATCATAGCTCATGTATAAGGTAGCCCATTGATACCCATGATGTCCAACAGAAAATACTAGCTACACTGTTCTATATATTAGGTAACTGGGTGAGCTTCCCTCCACCAGTAATGGATTGTACCAGATGCACTATGGC

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0007596 blood coagulation biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0047710 bis(5'-adenosyl)-triphosphatase activity molecular_function

KEGG:

id description
K18424 ENPP4; ectonucleotide pyrophosphatase/phosphodiesterase family member 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004145 True 4989 mRNA 0.41 4 35398380 35406953

Neighbor

gene id symbol gene type direction distance location
AMCG00004149 NA coding upstream 38382 35357422 ~ 35359998 (+)
AMCG00004141 LOC107717234,LOC107594081,LOC107552040,LOC107653853 coding upstream 149455 35239232 ~ 35248925 (+)
AMCG00004140 runx2,LOC107378134,LOC102312376 coding upstream 187506 35207531 ~ 35210874 (+)
AMCG00004139 NA coding upstream 225348 35172476 ~ 35173032 (+)
AMCG00004137 cdc5l,LOC107594083,LOC106599718 coding upstream 420747 34964466 ~ 34977633 (+)
AMCG00004150 NA coding downstream 44118 35451071 ~ 35455522 (+)
AMCG00004151 NA coding downstream 50201 35457154 ~ 35458783 (+)
AMCG00004157 NA coding downstream 236043 35642996 ~ 35684393 (+)
AMCG00004163 NA coding downstream 428820 35835773 ~ 35837710 (+)
AMCG00004161 LOC107558762,LOC108441130,LOC106607809,LOC105897019,LOC107727350,LOC101885478,LOC103026919 coding downstream 660627 36067580 ~ 36073621 (+)
G5875 NA non-coding upstream 48353 34899636 ~ 35350027 (+)
G5914 NA non-coding upstream 91431 35301103 ~ 35306949 (+)
G5867 NA non-coding upstream 502719 34894102 ~ 34895661 (+)
G5808 NA non-coding upstream 1016281 34381868 ~ 34382099 (+)
G5804 NA non-coding upstream 1105879 34292271 ~ 34292501 (+)
G6002 NA non-coding downstream 48723 35455676 ~ 35455887 (+)
G6007 NA non-coding downstream 58909 35465862 ~ 35466655 (+)
G6067 NA non-coding downstream 413302 35820255 ~ 35820483 (+)
G6102 NA non-coding downstream 754653 36161606 ~ 36165870 (+)
G6224 NA non-coding downstream 1088887 36495840 ~ 36520594 (+)
AMCG00004138 fkbp1b other upstream 528060 34852863 ~ 34870320 (+)
G5642 NA other upstream 2267194 33130120 ~ 33131186 (+)
AMCG00004079 NA other upstream 2995997 32400405 ~ 32402383 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 4503553 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 5091205 30296867 ~ 30307175 (+)
AMCG00004158 NA other downstream 345497 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 620326 36027279 ~ 36045282 (+)
AMCG00004167 NA other downstream 854835 36261788 ~ 36278234 (+)
AMCG00004179 ptrhd1,LOC103399259 other downstream 1280677 36687630 ~ 36697885 (+)
G6314 NA other downstream 1367048 36774001 ~ 36774523 (+)

Expression


Co-expression Network