AMCG00004151


Basic Information

Item Value
gene id AMCG00004151
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 35457154 ~ 35458783 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004151
AAAGAAGTTAAGGTATATTTcacaattacacatttgaaaTCTGCAAAGTATAGAGCACTGTCACGTACAAAAAGAtctatggaaaaaaaagacGTTTGTGATTCTTaggtgcctgtgtgtgtgtgtatacatatacatttaaatataaatcaacacTTGTGGATCTGTTAATTCAGCTGCAATGGAGCTGTCCTGGAACTTTAGGTTTGGGATTGTTATCCTGGGTGACTCGGCTGTAGGGAAATCTTCCCTCTTGCATCGCTACACGGAAGGCACATTTGAGGAGTCTAGGCAGTCTCCTCTGGGCATTGACTTTAAAGTGAAGCACCTAGACTTCGACCCAGGGGTCATGATCAAACTCCTGCTCTGGGACACAGCTGGGCAGGAGAGATTCAGGTCGATCTCGAAGTCCTACATGAGAAATTCTGTGGGCTGCCTCATGGTGTTTGATATCTCCCAGAGGAAGACCTTTGAGAATGTGCGGAGCTGGCACACGGAGGTTGTGGAGTATGTGAAACCAGCCACTATGGTATTCACCCTAGTCGGGCACAAGAGTGACCTTCATGAACTCCGAGAAGTGAGCGAACATGAGGCGGAGGCCCTGGCGAGGAGCCTGGGCATGACAGGTTACATAGAGGTCTCCTCCAAGAACAATATGAATGTGGACCTTGCCTTTGAGACTCTCACCAAAGAAATCTACAACCAGTTTCACCTGGGGCAGATTCCTATGCATGACGGCTGGTATGGATTGACAGTTGGCACTCCACTGAAGTTCGAGAACACCGAGGAGCCAAAACCCAAGACGTCTGGCTGTGGTTGCGGGTGAAACCAGGAAGATCAGTTTGTTGTTATGGTAACCTTTTTAAGGCTGGACCCTGATTATTTTCACCTCTAAGCTTCATACTGTTGAATATTTTTTCAAGTaggctgctgttttgtttttattttcttgtgttttgtttggcatGTGCAtggtgtttttatgtatatatgtttatgtttgcCATGTATTCACAGGATTGgggaaaatgtttcaaaacctCGTTATGATCAATAAACTGCACAAAGGATTTTAGatgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004151 True 1081 mRNA 0.44 2 35457154 35458783

Neighbor

gene id symbol gene type direction distance location
AMCG00004150 NA coding upstream 1632 35451071 ~ 35455522 (+)
AMCG00004145 NA coding upstream 50201 35398380 ~ 35406953 (+)
AMCG00004149 NA coding upstream 97156 35357422 ~ 35359998 (+)
AMCG00004141 LOC107717234,LOC107594081,LOC107552040,LOC107653853 coding upstream 208229 35239232 ~ 35248925 (+)
AMCG00004140 runx2,LOC107378134,LOC102312376 coding upstream 246280 35207531 ~ 35210874 (+)
AMCG00004157 NA coding downstream 184213 35642996 ~ 35684393 (+)
AMCG00004163 NA coding downstream 376990 35835773 ~ 35837710 (+)
AMCG00004161 LOC107558762,LOC108441130,LOC106607809,LOC105897019,LOC107727350,LOC101885478,LOC103026919 coding downstream 608797 36067580 ~ 36073621 (+)
AMCG00004159 NA coding downstream 655718 36114501 ~ 36128960 (+)
AMCG00004165 NA coding downstream 675223 36134006 ~ 36158549 (+)
G6002 NA non-coding upstream 1267 35455676 ~ 35455887 (+)
G5875 NA non-coding upstream 107127 34899636 ~ 35350027 (+)
G5914 NA non-coding upstream 150205 35301103 ~ 35306949 (+)
G5867 NA non-coding upstream 561493 34894102 ~ 34895661 (+)
G5808 NA non-coding upstream 1075055 34381868 ~ 34382099 (+)
G6007 NA non-coding downstream 7079 35465862 ~ 35466655 (+)
G6067 NA non-coding downstream 361472 35820255 ~ 35820483 (+)
G6102 NA non-coding downstream 702823 36161606 ~ 36165870 (+)
G6224 NA non-coding downstream 1037057 36495840 ~ 36520594 (+)
G6225 NA non-coding downstream 1067885 36526668 ~ 36539067 (+)
AMCG00004138 fkbp1b other upstream 586834 34852863 ~ 34870320 (+)
G5642 NA other upstream 2325968 33130120 ~ 33131186 (+)
AMCG00004079 NA other upstream 3054771 32400405 ~ 32402383 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 4562327 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 5149979 30296867 ~ 30307175 (+)
AMCG00004158 NA other downstream 293667 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 568496 36027279 ~ 36045282 (+)
AMCG00004167 NA other downstream 803005 36261788 ~ 36278234 (+)
AMCG00004179 ptrhd1,LOC103399259 other downstream 1228847 36687630 ~ 36697885 (+)
G6314 NA other downstream 1315218 36774001 ~ 36774523 (+)

Expression


Co-expression Network