AMCG00004157


Basic Information

Item Value
gene id AMCG00004157
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 35642996 ~ 35684393 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004157
ATGGAGCTGCTCTCCCCGGGATCCCCTTCGCCGTTCCCCACCGTTTCGTCCAGGTTGTGCAGTTGGGCGAAACCGGTAACGACCCCCACGCCATCAGATTTCGCTGCCATCTTGCTCTCTGAAGCTCCCCCCTCCGCCTTCCGGGATGCAAACCCCCCTTCACCCTTATCTCAGTCTCACAAGAGAGTCTGGTACAGGCAACTCAACAGAGTAGTGTACTGTTTTGACAACGAGGCTCCAATgGAGAGCTTGCTGAAGCGGGGGGCGAAACCTGAAGTGAGCAATCCCATGAGATCCAAGGTGCTGAAACAAACGTCTGCCAACATGGCTCCAATGGGAGGCCCAGTCTTCCTGCTATTCCTGGGGTCCGTGGGGCAGATTCTGTCACAGCTCCCCGGCTCCTTCCACTTCAGTGAGCACTTCCTGGCTGACAGAGCTGGAAGGGGCGGGGCCTATCAGACCCGCTTAGTGCGGGTTGGTTGCAGTGTTGGCGCGCTGTTCGAACTACAGTCACAGAAAAAGCCGGGAACAGAGTCAACAACCTGTCCTGAGCGGATCTCAGCGCGGATTGCCTTTATatcattgaaaaacatttcGTTCAGACTCGGTTTTATGGGGAAAATGTTGCCTTATGGTGAGAAGAGGAAACTCAGCTCAGTGGGGTCTGAAAGTAATCCCGCAAAGAAGCAGATGCTGGAGAGTGGATCTCCCAAAAGACGGAAGTCTCCTAGGCTCCCCCAGTCCAGTCTGGGAAGGAAAGTGACAGACTCCACCGATGAGGAGGATAAAGAAAATGTCCCATCTCCAAAAAGACAGACAGCATCTCCCTCTTCTTCAGCTCCGGCTCCCAAAAGTATTTTCCAACGTTCACCACTCAAGAGTTCTCCAAGGAGAGCGTCACCCTATAAAGCGTCAGTGGCCGCTGGCTCTTTCTACAGCCAGAAGAAAGTGCTCTACCTGACGCCACTGGAGAGGAAAGTGATCGGCCAGAGCAAACCGCACAGCAACCAAGGAAATGGTGATCAGAGCAGTCCTCCTAAAGCCACAAAGGGTCCCAAGACAAGGAGGCTGTTGTCTGTGAAAAAGCTGAGCTCTGCTCATGGTTCAAAAGCACGAATTACAGACTTCCTGGACCCAAAACCATCTGGGGGTGACCAGGTGTGTGCTGAACCCCAGCATCTGAAGGAGAGGGGCACCACGCAGGCCGAGTCCAGTGCAGGGTCTTCCCTGGGCTTTATTGGCCTGAAAACCAAACCCAAAGCCAGACCCAAGCTATTTGTTGGGGCTGCGTTCTTTGCCACCgggaaaaaagcaaacaccCTTTATAGAAAAGCCGTCGAGAAATCCAACCGGCCGGTCCAGGCCAAGCCCAAGCCCAAGCCCAAGCCAGCCAAAGGGAATGGTGACAAGGACACCCAGGCCCAGGTTATCGCAAAGGGGCTGGAAAGGGAGCAGGTAGAGAAGGTTGCCACTCTGGGGCAGAAAGCAGTGACTCGGCAGAAAGAAATCCCACTGACAGCAGCTGAAGGGAAGAGAAGTATAGAGCCCAGGCATCCAGCTAATGCCCCAGAGAAACAGTCACAAACAAAGGCACAAATCCCTGAAATAAACCCATCCCAAGCCCTGCTCAGGAAACATGGCCTGAGAAAGCAGTTGAAGGTTGTGCTGAGGAGGCTGGACGGAGGCCATGGGAGTCCGGGAGACGCTGCGGATGAGCTGAGCATTGAGGACTGCAGCACAGTGGAGACGGGATCTGATGCAGTGTTTGATCTCAGTGAAATTAACTCGCCAGGTCCACACCACAATGCACAAAAAGGCAGAGGGGCGCTATCTTCTCCGGTCAGGTGCAGCACGCCGTCTGCTGCCGTGCCCGCTCTGCCCACTTCAGCAAAGCTCCAGAGAAACACCAGGAGGAGGAAGGACCTGGAGAAGGAGTCCGCAGACCAGCTCATCATTGATGCCGGGCAGAAGCAATTTGGTGCCACCGTGTGCAAATCGTGTGGCATGATCTACAGTGCCGACAGCCTGGAGGACGACTTCCAGCACACACAGTTCCACCAGCGCCTTCTGGACAGCATTAAGTTTGTGGGCTGGAAGAAGGAGCGTGTAGTAGCTGAGTTCTGGGATGGAAAAATAATCCTCGTTCTCCCAGACGATCCAAAGTATGCCGTTAAAAAGGCAGAGGAAGTCCGACAGCTTGCAGACAATGAGCTCGGCTTTCAACAAGTCTCTCTGAACCGTCCCAACAAAACCAGAACCTACCTTTTTGTGAACAATGACAGGATGATTGTCGGGTGTCTTGTAGCTGAACACATCAAACAGGGATTTCGAGTGCTGCAGGAGCCGGAGACTGCCAGGGACATGCGCAAGCCCGACTTCATGGAGCACCACCGGGCCTGGTGCTGCTCGACCGAGCCCCAGAATGCCATCTTTGGAGTGAGCCGGATCTGGGTGTTCAGTCTGATGAGGAGGAAGGGCATTGCCACCCGCATGCTGGACACGGCCAGAAACTCTTTCATGTATGGATGCTTCCTAAATAAAGATGACATTGCATTCTCAGACCCCACCCCTGATGGAAAACTCTTCGCTACAAAATACTGCGGAACACCAGCATTTATGGTTTATAACTtcattagttaaaaataaatgtataccatttttttcccctgtttgCCACAAAAAAGTCCTGATAAGTTTTCATAGTTAAACAAGTTGTTGAAAAGCTGAATAGAATTCAGAAGAGAAACTGGGAGTTTGCCCTTAATTATAGCTGTTGCGCTCATGTTTTCTGCTTTGAATTTATGAAAGGCGAGGTTCACATAGATAATGTTGGACTATTTTCAACCTATTCAAGTAGGTTGTTTCACATCTACTGCATTCATGGATGTTTCTACTAGTTTCCTATGACTGAACATGTTTATTGCAAATGATCTTCAATCGGATGGGTCTAAGAATATATTTCACAAGTGTATTTCAgctaatttaaatacagaattgtTAAGTTGTAATGTTTTAGTTGTAAATATTAGATGGAATAaagttttactttaaaa

Function

GO: NA

KEGG:

id description
K11268 ESCO, ECO1; N-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004157 True 3053 mRNA 0.51 15 35642996 35684393

Neighbor

gene id symbol gene type direction distance location
AMCG00004151 NA coding upstream 184213 35457154 ~ 35458783 (+)
AMCG00004150 NA coding upstream 187474 35451071 ~ 35455522 (+)
AMCG00004145 NA coding upstream 236043 35398380 ~ 35406953 (+)
AMCG00004149 NA coding upstream 282998 35357422 ~ 35359998 (+)
AMCG00004141 LOC107717234,LOC107594081,LOC107552040,LOC107653853 coding upstream 394071 35239232 ~ 35248925 (+)
AMCG00004163 NA coding downstream 151380 35835773 ~ 35837710 (+)
AMCG00004161 LOC107558762,LOC108441130,LOC106607809,LOC105897019,LOC107727350,LOC101885478,LOC103026919 coding downstream 383187 36067580 ~ 36073621 (+)
AMCG00004159 NA coding downstream 430108 36114501 ~ 36128960 (+)
AMCG00004165 NA coding downstream 449613 36134006 ~ 36158549 (+)
AMCG00004164 si:ch211-243j20.2,LOC108429346,LOC107676254,LOC108279217,LOC107602209,LOC103363074 coding downstream 503100 36187493 ~ 36211948 (+)
G6007 NA non-coding upstream 176341 35465862 ~ 35466655 (+)
G6002 NA non-coding upstream 187109 35455676 ~ 35455887 (+)
G5875 NA non-coding upstream 292969 34899636 ~ 35350027 (+)
G5914 NA non-coding upstream 336047 35301103 ~ 35306949 (+)
G5867 NA non-coding upstream 747335 34894102 ~ 34895661 (+)
G6067 NA non-coding downstream 135862 35820255 ~ 35820483 (+)
G6102 NA non-coding downstream 477213 36161606 ~ 36165870 (+)
G6224 NA non-coding downstream 811447 36495840 ~ 36520594 (+)
G6225 NA non-coding downstream 842275 36526668 ~ 36539067 (+)
G6240 NA non-coding downstream 869511 36553904 ~ 36555108 (+)
AMCG00004138 fkbp1b other upstream 772676 34852863 ~ 34870320 (+)
G5642 NA other upstream 2511810 33130120 ~ 33131186 (+)
AMCG00004079 NA other upstream 3240613 32400405 ~ 32402383 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 4748169 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 5335821 30296867 ~ 30307175 (+)
AMCG00004158 NA other downstream 68057 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 342886 36027279 ~ 36045282 (+)
AMCG00004167 NA other downstream 577395 36261788 ~ 36278234 (+)
AMCG00004179 ptrhd1,LOC103399259 other downstream 1003237 36687630 ~ 36697885 (+)
G6314 NA other downstream 1089608 36774001 ~ 36774523 (+)

Expression


Co-expression Network