AMCG00004168 (dnajc5g,LOC103043078)


Basic Information

Item Value
gene id AMCG00004168
gene name dnajc5g,LOC103043078
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36288395 ~ 36300239 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004168
TCTTCTTCTATTTGCAGAATTAAATCATGGCAGAACAAAACAGACATCAACGAAAGATGTCCACGGCGGGAGAGAGTTTGTACAGGACACTAGGACTGGAGAAAGGGGCATCGGCGGAAGACATTAAGAAATCTTATAGGAAACTGGCACTGAAGTATCATCCTGACAAGAATCCTGATAACCCAGAAGCAGCGGATAAGTTTAAGGAAATCAACAATGCCAACTCGATTCTCAATGACGAGAACAAGAGGAAGATCTATGACGAGTATGGTTCTATGGGACTGTATGTGTCTGAGCAGTTTGGAGAGGAGAGTGTTAAATATTACTTCTTGATGTCCAAGTGGTGGTTTAAGGCCCTGGCGGTTTGTTGTGGCATCTTcacctgctgctgttgctgctgctgttgctgtttctgCTGTGGGAAGTGCAAGCCTGCCGAGGAGGATGAGAACTATCAGTATGTGGACCCTGAGGATCTCGAGGCCCAGATCAGAGCTGAGCAAGAAGCAGGTGACACTATTATTATCGCGCAGCCTATTCCTAGCTCAGCCCCGGAAAACTCAGGAAAGAGCATCCCAATTGTGATCCAGCCACATTCCTCTAGCAACACAACCGAGTCTAGCCAGCTCTCAAACGACCAGAAACCCAGCCACACACCGGAGAAGTAACTACGCCAAGGAATCCCAGGCCTACAGAGGACTTCTTCCACAGGTTTACAATCTGGCTCACCGATGCCGATGCCTGTGTGATTAGGAATGTCCGTGTCATGTGAGGAAACGTTTGCCAACATGCTATTTTGaatgagaaaggaaaaaactaaaaaataaaagggattCTTCTAACGTCTGTGCCACTCTCAAAGCCAAACAGTCTGCTGTTCCTCAGATGTTCATTTCCCTGTGGCACGCAAATTAATTGTTCCCAAAATGAATTGCTCGtctctctaaaaaaaaaaaaaaaagtttgaaaattgTAGTAGTCTATTGGGTCACGGTTTTGTCACAGTGCTACCCCGATGCGTGGCTCGTGGATGCAATCGTGTCTCAAGTGCATGTACTCGATAGAAGCACGTGGACACTGCTAGAAGTCCTCAAGTATACACTTTGCTCCTGTGCCATGTAATAAGACATCTTGCCATACCAGTACTTCTGTGGACTCGCACTGACTAAGGTAATCAAGTTTACAAGCTGATGGTTGTGTTGCTTTCCTGAAAAAAGTTAATGAGCCAGTATGTGTTTTCagttagtgtgtgttttttttttaatagcactttatttctttcttgaaaatgtttagaaaggagaattaaattgagaaaatgtgAACATAGGTGTTTGATCCGAACcaaattgagattttttttaatacagcagaACGTTGGACCACACAGTTGTGGGATCTAAGACATGAGATCTCTATCCTTGCATTTTACAGCACTGTTGATTATATCTGGGTGATGTCAGCACTGCAGCATTTCCTCTTGATTGAATGCGACTGATTCACACGTACAATACCTGGTACCTTCTGTCCGGCCCATAATGGCagtggaaaaatgttttttaaatgtaccctCTCAGATTTCATAGACTCATTATTTTGGGTACCAAATAGGCATTGTGATACTCAATGCAGAAGATTATTTGTAAACTATCAGTCAATGTAACGTAAACTAGGGAAAAGTTGGTTGAGTTGCTGCACAAAGTTAGCACGGCGTCACTGTGGCTTTAGAGCTACCTTGTGTCAGTTGCATAATTGAGAGCCAGACTGACAGCTCTGTCATTGCAATAATGAGTAGCTCGCTCGTATATGTCCATCTGAGGGAGTCAgttatatttctctctctgtgtacacAGTGAACATCTACTCCTACAGTTCTACTGGAGCGGGTCTTGCAGGACATTTCTTTCAGGGTTCTGGATCAGTGAAAAACGATTCGAGCCACTTTCTTTGCATACGTTTGTTGGAAGCAAATAATACAGACAGGAAGTTAGATGCAGACAAATATGcatcacaaaaaacatttctatgccaaattaaatgttctgcTTGCTGCTGCTACTTGCTGTTACAACACCAGACAAAAAGATAATCATAAACCACTATAAAtgcttgtttagttttttttttttttt

Function

symbol description
dnajc5g Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: dnaJ homolog subfamily C member 5G isoform X1

GO: NA

KEGG:

id description
K09525 DNAJC5; DnaJ homolog subfamily C member 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004168 True 2132 mRNA 0.42 5 36288395 36300239

Neighbor

gene id symbol gene type direction distance location
AMCG00004169 NA coding downstream 2987 36277958 ~ 36285408 (-)
AMCG00004162 slc30a3,slc30a2 coding downstream 115696 36167301 ~ 36172699 (-)
AMCG00004155 NA coding downstream 568208 35696622 ~ 35720187 (-)
AMCG00004156 LOC107676230 coding downstream 596462 35685255 ~ 35691933 (-)
AMCG00004154 LOC107723320,LOC107746102,LOC107701509,LOC107561941,LOC105897758,LOC105895740 coding downstream 645290 35642527 ~ 35643105 (-)
AMCG00004172 LOC106571444,LOC106607850 coding upstream 12682 36312921 ~ 36339478 (-)
AMCG00004171 NA coding upstream 39935 36340174 ~ 36344689 (-)
AMCG00004175 NA coding upstream 194862 36495101 ~ 36495451 (-)
AMCG00004177 rcan2,LOC108429336,LOC107675064,LOC107727622,LOC107602203 coding upstream 275013 36575252 ~ 36577556 (-)
AMCG00004185 NA coding upstream 345774 36646013 ~ 36663669 (-)
G6136 NA non-coding downstream 17577 36269114 ~ 36270818 (-)
G6129 NA non-coding downstream 31206 36256989 ~ 36257189 (-)
G6103 NA non-coding downstream 124961 36161647 ~ 36163434 (-)
G6077 NA non-coding downstream 308556 35979439 ~ 35979839 (-)
G6068 NA non-coding downstream 467912 35820258 ~ 35820483 (-)
G6197 NA non-coding upstream 86123 36386362 ~ 36390506 (-)
G6199 NA non-coding upstream 99926 36400165 ~ 36401482 (-)
G6200 NA non-coding upstream 102153 36402392 ~ 36403386 (-)
G6241 NA non-coding upstream 253668 36553907 ~ 36555108 (-)
G6243 NA non-coding upstream 255867 36556106 ~ 36557331 (-)
AMCG00004143 mut,LOC107726528,LOC107697172,LOC107726757 other downstream 873949 35344663 ~ 35414446 (-)
AMCG00004132 NA other downstream 1324510 34954706 ~ 34963885 (-)
G5871 NA other downstream 1395782 34891901 ~ 34892613 (-)
G5801 NA other downstream 2152795 34132098 ~ 34135600 (-)
AMCG00004120 NA other downstream 2256848 34015368 ~ 34031547 (-)
AMCG00004178 NA other upstream 195533 36495772 ~ 36540841 (-)
AMCG00004189 NA other upstream 468809 36769048 ~ 36779062 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other upstream 483504 36783743 ~ 36787122 (-)
AMCG00004203 NA other upstream 1023771 37324010 ~ 37381953 (-)
G6441 NA other upstream 1067746 37367985 ~ 37368822 (-)

Expression


Co-expression Network