AMCG00004181


Basic Information

Item Value
gene id AMCG00004181
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36670315 ~ 36677129 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004181
TTCCTCTAAAAGTAATGTTGGAACCATATCGTAGAGGATTATGGGAATTTTTACTTAATCTTCCTGCTTAATTGAGAATTCACCACCATTGCTGCGGATCAGACGTATGCAATGGCAGCGATATCTGAAAGCAAGAAGCTTTATTCTCAACTATTATCATATGcTGAATCATTGAGAAACCATTCAAGccCTCGTGATTTCCTTATTCTAGATGACATTCACCAAGTAATGAAAGACCCCCGAATTgccttaaattacatttcatctGGAGGGGAATTTCAGAATTTTAAACTGAGTAATACATGTGTGCTAGACTCACTTTTGACAGGTTTACATCtaacttcaaaaacaaatgaacacataAGGGATATTTTTCTAGTGGACAATACCATCAGACCAGTCATAACACTGTTAGATTATAAAAAGTTTGACATGGCTAAAATTCTCTGGATTCTTAATCTAGAGATAGATTATGATggtaaaaaaagcttttttgaaggtgagtttataaatgtacaaaGCAATATTAGCGATCACCTTAGAAATTTCCAGCATCTTAAATGTGCCAGCCTTTACTTTGATGATCAAAGACTGAGTCCACCTCCTGAAGATCGTTCAAGTTGTATTTTGAAGAAAACACTGAGaaaatttGAAAACTATGGTGATGTTCTCGCCCTTGGAAATACACATAATCCTGTAATGATTCTCATTCATGTGGATGGCCGACTTCAAGACATTACTCCATTGTCCATTTCTGATATTTATGGAAGGACATTCGAGCTTCAGTTTCTTCTGCTCGGCATTATGACTAAAGAGTCGAACCACATGGTCCTCTGCATTAAGCTGGATAGAGGATGGCTGCTGTATGATGATCTGAACAGCTCTTTATTCCAGCACGTTGACATCAACGATGTGAGGTCATACACCAAAACTGGGGCCTGGGTGGTATACCTTGCTGCCTATGCATATCTTGAGTCTCGCTAAGAGTCCTGGGCCTTTTAGGGATGCGGGAAGATAACTGCATCGTGACAGTGTTAAGCCCTGTACAATAAAAGGCcaggcatacacacacaacagtctCGACAATGGCTTTTATAGCCTCACTCCAGGTTAGAGGGCCACTCTCGGTGGAGAGATGGAAGAGTGTGCACTGTAATGACAGATGGGGGGGTAGAGTAGCAATCTCGAGCCTCACTAAGAGGcctgtgctgcactgtggcgCAGGAGAACGGGGTTCGAGTCCCCGTCGCGGCTGGAAACCCCGAGTCGTTACAATATACTgtttaattgtcattttaaaataaaatggttataattaaatctgtgcttcattattaaaacacatttgagatCATACTCTAGTTAGAATAGGGTGTGCCGCATGGATTACCAGTTTTCAGAGCTTTTTAGAGGTTTTTATTCTTCACATTATTTCCCTGCCATATGCGTTTCCTTTTTTGAACGCAACATCGTGTTTTGTa

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004181 True 1481 mRNA 0.40 6 36670315 36677129

Neighbor

gene id symbol gene type direction distance location
AMCG00004185 NA coding downstream 6646 36646013 ~ 36663669 (-)
AMCG00004177 rcan2,LOC108429336,LOC107675064,LOC107727622,LOC107602203 coding downstream 92759 36575252 ~ 36577556 (-)
AMCG00004175 NA coding downstream 174864 36495101 ~ 36495451 (-)
AMCG00004171 NA coding downstream 325626 36340174 ~ 36344689 (-)
AMCG00004172 LOC106571444,LOC106607850 coding downstream 330837 36312921 ~ 36339478 (-)
AMCG00004183 NA coding upstream 648 36677777 ~ 36681459 (-)
AMCG00004182 ptrhd1,LOC103399259,LOC106571548 coding upstream 8161 36685290 ~ 36691361 (-)
AMCG00004184 LOC102789059 coding upstream 20594 36697723 ~ 36721486 (-)
AMCG00004194 NA coding upstream 243936 36921065 ~ 36960702 (-)
AMCG00004195 NA coding upstream 294262 36971391 ~ 37005951 (-)
G6243 NA non-coding downstream 112984 36556106 ~ 36557331 (-)
G6241 NA non-coding downstream 115207 36553907 ~ 36555108 (-)
G6200 NA non-coding downstream 266929 36402392 ~ 36403386 (-)
G6199 NA non-coding downstream 268833 36400165 ~ 36401482 (-)
G6197 NA non-coding downstream 279809 36386362 ~ 36390506 (-)
G6309 NA non-coding upstream 88443 36765572 ~ 36765809 (-)
G6326 NA non-coding upstream 103349 36780478 ~ 36780691 (-)
G6374 NA non-coding upstream 235109 36912238 ~ 36920856 (-)
G6384 NA non-coding upstream 350899 37028028 ~ 37028244 (-)
G6437 NA non-coding upstream 638507 37315636 ~ 37318149 (-)
AMCG00004178 NA other downstream 129474 36495772 ~ 36540841 (-)
AMCG00004143 mut,LOC107726528,LOC107697172,LOC107726757 other downstream 1255869 35344663 ~ 35414446 (-)
AMCG00004132 NA other downstream 1706430 34954706 ~ 34963885 (-)
G5871 NA other downstream 1777702 34891901 ~ 34892613 (-)
G5801 NA other downstream 2534715 34132098 ~ 34135600 (-)
AMCG00004189 NA other upstream 91919 36769048 ~ 36779062 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other upstream 106614 36783743 ~ 36787122 (-)
AMCG00004203 NA other upstream 646881 37324010 ~ 37381953 (-)
G6441 NA other upstream 690856 37367985 ~ 37368822 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other upstream 3164806 39841935 ~ 39849123 (-)

Expression


Co-expression Network