AMCG00004183


Basic Information

Item Value
gene id AMCG00004183
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36677777 ~ 36681459 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004183
cagaTTGAGGGAATTgcagaaagaagaaaattacATGAAAGTAGCAAACCTTGAGGgcatcatttgtttttgttattttttaagacaaaaTCTCTTCCATGTCAGATCATAAAGAACAGACACCAAAGCATGTGgAGTCGATGCTCGCAGTATGCTTTGAGGTACCAGGGGGCCCAGAGAATCTGCTGTTAAAGAGTGTACCCAGACCCAAGCCCAAAAATGGGGAGGTCCTTATCAGAGTTCATGCCAGTGCATTAAACAGAGCTGACTTGCTACAGAGGAGAGGAAAGTACCCCCCACCTCCTGGAGCGAGTGAGCTGCTGGGTCTGGAGGCTGCTGGGGAGCTGATCGAGCTGGGATCAGGGTGCAGCGGCCGCTGGAGGCCTGGAGACAGGGTGATGGCACTGCTCTCGGGGGGAGGCTACGCAGAGTATGTGGCAGCTCCGCAAGAACACCTCCTGCCAGTCCCCAGTCACTTCACCTTCCAACAGGCAGCTGCCATTCCCGAGGCCTGGCTGACCGCCTTCCAGCTCTTACACTTCGTAGCCGCAGTGAAGGAGGGGGAGACGGTGCTGGTCCATGCGGGGGCCAGTGGAGTGGGCACGGCGGCCATCCAGCTGGCACGTTTGGCAGGAGCTGTTCCCATAGTAACAGCTGGAAGCCCTGAAAAACTGAAGATGACTGCAGAACTGGGGGCTGCAGCTGGATTCAACTACAAAGAAGAGGACTTCTCACAAAAAACCCTAGAGTTCACACAGGGTTGTGGGGCAGATGTCATCCTGGACTGTATTGCTGGCTCCAACTGGGAGAGCAATGTGAAGTGCTTGAGGACTGATGGCAGATGGGTGGTCTATGGGACAATGGGAGCCAGGGATGTACACGGTGACCTACTGGGGAAGCTGCTGTCTAAAAGGGGACAGCTCCTCACAAGCCTCTTGAGATCCCGCACTATAGAGTATAAAGCGGAGCTGGTGAAAGCCTTCGTTGACAGAGCCCTGCCTCACTTCTCTCCCGCCTCCCCTGCTGCCCTTAGGCCTGTGATTGACAGCGTGTACAGCATGGAGCACATCACTGAGGCCCATAGGCACATGGAAGCCAACAAGAACTCTGGCaaaattatcattaatattcatACAGCACCATCAAACCTGGGATGATGATGTCGTTTTAGGAGAACTTTCAACTTccagttaataaaaaatataataatcaaaagGAATATGTATTTCATGTGAAACTCTTTCAATCTTGACATATATTGGGgaacaaaatattcaaataatagaGTGTGAATGATTagttatttaaacacaattaaataaatcaggttTAATTTCTGTGCTTGTACTTGGCAATTGGCTTTACAATCAAAGTTgtcatgtatgttttattttggttttaataaacacaaaataaaatattgccaCTG

Function

GO: NA

KEGG:

id description
K10133 TP53I3; tumor protein p53-inducible protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004183 True 1429 mRNA 0.48 6 36677777 36681459

Neighbor

gene id symbol gene type direction distance location
AMCG00004181 NA coding downstream 648 36670315 ~ 36677129 (-)
AMCG00004185 NA coding downstream 14108 36646013 ~ 36663669 (-)
AMCG00004177 rcan2,LOC108429336,LOC107675064,LOC107727622,LOC107602203 coding downstream 100221 36575252 ~ 36577556 (-)
AMCG00004175 NA coding downstream 182326 36495101 ~ 36495451 (-)
AMCG00004171 NA coding downstream 333088 36340174 ~ 36344689 (-)
AMCG00004182 ptrhd1,LOC103399259,LOC106571548 coding upstream 3831 36685290 ~ 36691361 (-)
AMCG00004184 LOC102789059 coding upstream 16264 36697723 ~ 36721486 (-)
AMCG00004194 NA coding upstream 239606 36921065 ~ 36960702 (-)
AMCG00004195 NA coding upstream 289932 36971391 ~ 37005951 (-)
AMCG00004196 cnih3,LOC107553421,LOC106607867,LOC107601529,LOC107732540 coding upstream 368542 37050001 ~ 37052773 (-)
G6243 NA non-coding downstream 120446 36556106 ~ 36557331 (-)
G6241 NA non-coding downstream 122669 36553907 ~ 36555108 (-)
G6200 NA non-coding downstream 274391 36402392 ~ 36403386 (-)
G6199 NA non-coding downstream 276295 36400165 ~ 36401482 (-)
G6197 NA non-coding downstream 287271 36386362 ~ 36390506 (-)
G6309 NA non-coding upstream 84113 36765572 ~ 36765809 (-)
G6326 NA non-coding upstream 99019 36780478 ~ 36780691 (-)
G6374 NA non-coding upstream 230779 36912238 ~ 36920856 (-)
G6384 NA non-coding upstream 346569 37028028 ~ 37028244 (-)
G6437 NA non-coding upstream 634177 37315636 ~ 37318149 (-)
AMCG00004178 NA other downstream 136936 36495772 ~ 36540841 (-)
AMCG00004143 mut,LOC107726528,LOC107697172,LOC107726757 other downstream 1263331 35344663 ~ 35414446 (-)
AMCG00004132 NA other downstream 1713892 34954706 ~ 34963885 (-)
G5871 NA other downstream 1785164 34891901 ~ 34892613 (-)
G5801 NA other downstream 2542177 34132098 ~ 34135600 (-)
AMCG00004189 NA other upstream 87589 36769048 ~ 36779062 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other upstream 102284 36783743 ~ 36787122 (-)
AMCG00004203 NA other upstream 642551 37324010 ~ 37381953 (-)
G6441 NA other upstream 686526 37367985 ~ 37368822 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other upstream 3160476 39841935 ~ 39849123 (-)

Expression


Co-expression Network