Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004185 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 36646013 ~ 36663669 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | molecular_function |
| GO:0004497 | monooxygenase activity | molecular_function |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| id | description |
|---|---|
| K07439 | CYP39A1; 24-hydroxycholesterol 7alpha-hydroxylase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004185 | True | 1449 | mRNA | 0.48 | 12 | 36646013 | 36663669 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004177 | rcan2,LOC108429336,LOC107675064,LOC107727622,LOC107602203 | coding | downstream | 68457 | 36575252 ~ 36577556 (-) |
| AMCG00004175 | NA | coding | downstream | 150562 | 36495101 ~ 36495451 (-) |
| AMCG00004171 | NA | coding | downstream | 301324 | 36340174 ~ 36344689 (-) |
| AMCG00004172 | LOC106571444,LOC106607850 | coding | downstream | 306535 | 36312921 ~ 36339478 (-) |
| AMCG00004168 | dnajc5g,LOC103043078 | coding | downstream | 345774 | 36288395 ~ 36300239 (-) |
| AMCG00004181 | NA | coding | upstream | 6646 | 36670315 ~ 36677129 (-) |
| AMCG00004183 | NA | coding | upstream | 14108 | 36677777 ~ 36681459 (-) |
| AMCG00004182 | ptrhd1,LOC103399259,LOC106571548 | coding | upstream | 21621 | 36685290 ~ 36691361 (-) |
| AMCG00004184 | LOC102789059 | coding | upstream | 34054 | 36697723 ~ 36721486 (-) |
| AMCG00004194 | NA | coding | upstream | 257396 | 36921065 ~ 36960702 (-) |
| G6243 | NA | non-coding | downstream | 88682 | 36556106 ~ 36557331 (-) |
| G6241 | NA | non-coding | downstream | 90905 | 36553907 ~ 36555108 (-) |
| G6200 | NA | non-coding | downstream | 242627 | 36402392 ~ 36403386 (-) |
| G6199 | NA | non-coding | downstream | 244531 | 36400165 ~ 36401482 (-) |
| G6197 | NA | non-coding | downstream | 255507 | 36386362 ~ 36390506 (-) |
| G6309 | NA | non-coding | upstream | 101903 | 36765572 ~ 36765809 (-) |
| G6326 | NA | non-coding | upstream | 116809 | 36780478 ~ 36780691 (-) |
| G6374 | NA | non-coding | upstream | 248569 | 36912238 ~ 36920856 (-) |
| G6384 | NA | non-coding | upstream | 364359 | 37028028 ~ 37028244 (-) |
| G6437 | NA | non-coding | upstream | 651967 | 37315636 ~ 37318149 (-) |
| AMCG00004178 | NA | other | downstream | 105172 | 36495772 ~ 36540841 (-) |
| AMCG00004143 | mut,LOC107726528,LOC107697172,LOC107726757 | other | downstream | 1231567 | 35344663 ~ 35414446 (-) |
| AMCG00004132 | NA | other | downstream | 1682128 | 34954706 ~ 34963885 (-) |
| G5871 | NA | other | downstream | 1753400 | 34891901 ~ 34892613 (-) |
| G5801 | NA | other | downstream | 2510413 | 34132098 ~ 34135600 (-) |
| AMCG00004189 | NA | other | upstream | 105379 | 36769048 ~ 36779062 (-) |
| AMCG00004188 | srp9,LOC107553440,LOC107601484 | other | upstream | 120074 | 36783743 ~ 36787122 (-) |
| AMCG00004203 | NA | other | upstream | 660341 | 37324010 ~ 37381953 (-) |
| G6441 | NA | other | upstream | 704316 | 37367985 ~ 37368822 (-) |
| G6792 | hs90b,hsp90bb,hsp90ab1 | other | upstream | 3178266 | 39841935 ~ 39849123 (-) |
