AMCG00004194


Basic Information

Item Value
gene id AMCG00004194
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36921065 ~ 36960702 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004194
acaACATTAAAACTGACAGTTGGCGTTGGATCATTATGGATGGCCCTGTAGACACACTGTGGGTTGAGAATTTAAACTCGGTACTAGATGACACTAAAACCTTGTGTCTGGCGAATGGGGAACGAATCATCTTGCCTGCGGGAATGAGACTCATATTTGAAGTTGACACGCTGTCTCAAGCCAGTCCGGCCACTATAAGTCGTTGTGCGATGGTTTACATGTCATCTAGAGTATGCCAGCCCAATACAGGGGTGCATTTGTTCCCTGGGAAGAACTGGTTCCGTCTACTGAAACCCTTATTCATAAAGGCAAgACTAAATATGTCCTCCTTCTCTGGATCGCTGATGTCTGCAGGGGTCACCAGAGCAAACCCAGGAGAAAATGTGGAGCCAAATGATGTGAATATGCCAGTCCCAGATGAGTATGGAGCCCAGCCTCCACTGGAGCTCATTCGGCAGTTCTTGGAGCTTCAAGGAGTCTTTGACACCAAGAACCTCACCTGGAGGAATATTGAAGATGTGACATTATTTGCTGCCTGTGCTCCACCTGGAGGTGGGCGGCATGACATCAGCACACGTCTTCTGAGACATTTCTCCGTCATAGCTCTGCCGCATCCATCCGTGCAGTCCCTGCAGCACATCTTCCAGGTCCAGCTCGGGCGATTCCTGGGGAGCCGTGACTTTGTGGCCGAAGTGCAAAAGTGCAGGGCCCCACTGGTTTCCGCTTCTATTGCTGTCTATCAGGAGATGTGTCAAAGCCTGCTGCCCACGCCAACAAAATATCACTACACTTTCAATCTCAGAGACCTCTCCAAGgtcattCAAGGTCTACAGCAAGCCCACGAGTCAGAGCTGATTTCCAGGGAAGCTGCGGCCCAGCTGTTTGTGCATGAGGCCACTCGTGTGTTCCACGACCGCCTGGTTAATGATCAGGACAGAGAATTGTTTCATCGGGTTCTATCCAGAGAACTCCATAACTATTTTAAGgtCTCTTGGCCAGTTGAAAACCTGATGAAAGAACCCATTATATTTGGAGATTTTGTGGACATGAACGTCCCAGCTACACGcagaatatataaacaaattgcAGATCAAAGGAAACTACAGACAGTCTTGGAAGAATATCACATCAGAAGCAGCAGTGGAAACTCACAGTTTCCGATGGTGTTCTTCAAAGAGGCAGTGCAGCACATTACTAGAGCTGCCAGGGTGTTCAGACAACCAGGAGGACATATGATGCTGCTTGGACTGGACGGCACAGGAAAAGTCACCTGTGCATCACTGGCCTGCTACATTTCAGGCTGCCACCTCTATAGGCTGGCTGTGTCCCGTAGTTACAGCCACCCCGACTTCCGCGAGGATCTGAAAAAGGTCTTCAAGCAGACAGGACTTCACAGACAAAACACCGTGCTTCTCATCACAGATTCAGACATAGTTGAGGACTCCTTCCTTGAGGACATAAACTGCATTGTGAACTCTGGTGAGGTGCCTGGCTTGTTTGACAATGAAGAGATTGATGGAATTGCTGTTCAGCTCAACACAGTTGCAGAAGGGTCTGTCAATGACAGCAGAGAAGAACTGTATGCATTTTTCCTGAAGCAAGTGCGGCAGAGACTTCACATCGCTGTGGCATCCAGCCCGGCGGGGGCCACTCTGCGCCAGTACTGCCGTGTGCACCCGGCTCTGCTCAACTGCTGCACTATAGACTGGTACAGTGAGTGGACCAGAGATGCCCTGCTCAGAGTGGCCGAAATCTACATTCACTCCATGGACCTGCGTGACAAACACAAGGGTCTGCAGGATGGTGTCGCTCAGGTGTGTGTGGATGTCCACCACAGTGTGTCTCTTGCTGTGGCCCAGTACTGGGAGGAGATGAGGAGGCATTATTATGTAACTCCCAGCAGTTTCCTGGAGTTCATAGACACATTCTCCAGAATGTCCCAAACTGAGAAAACTAAGATTCACAATATAAGGGATCGATTTAACAATGGACTGTCCACCTTATCTGAGGCCGCAGCCCTGGTCAGAGTAATGCAAGACGAGCTGGTGGCCTTGGGTCCCAAGATTGAAGAAAAGTCTCAGGATATTGAAGTCCTGATGGACAAACTGAAAAAGGACTCCGAGGCAGTGGAGCAGGTCCGGGCTATTGTCAAAATGGAAGAAGATATAATGAAAGAAGAAACTAGAATTGTTCGGGAATATGCAGAGCAAGCCACAGCTGATTTGAATGCAGTCATGCCAATGGTGGAGAAAGCAGTCTCTGCTCTGGATGCCCTAGAAAAATCAGACATCTCAGAAATCAGAGTTTATACCAGTCCCCCTGATTTGGTCCTGACTGTGATGCATGCAGTGTGTATCCTGCTGCAGCAGAAGCCTGACTGGAGCACGGCTAAACGGCTGCTGGGAGACCCTGGCTTCCTTAAGCGACTTGTTAGCCTTGATAAAGACAGCTTGCCTGAGAAGGTATTTTTGAAGCTACGAAGATATTCCCAAAATCCAGACTTCACCCCTGAAAAGGTTGGCTTAGTGTCTGTTGCATGTCAGTCCATGTGTCTTTGGGTTTTGGCTCTGGAACATTATCATGAAGTGCATAAGATGATTGAGCCCAAACAGAAAAAGGTAGAAGTGGCACAAGAAGCCCTGGCAAGAGCTCAGtggaaactgaaggaaaaacaaaaaagtctgaCAAAGATTGAGGAACACAGGCTCACTTTACAACAACGTTACAATGCAAGCGTTGCTGGGAAGAAAGAACTGGCAGAACGAAGAGAGCTGACCACACAGAGGCTGCAGAGAGCCTCTGTTTTAATATCTGCACTGGCAGATGAAAAGGGTCGCTGGGAGAAATCGGTGAGCGACTTGGAGAGTAAACTGCAGGGTATTGTGGGTGATGTGATGATCTCGGCTGCATGCGTTACGTATTTTGGAGGTTTCACCGCTGGATACAGGCGGACACTGCTACACACATGGCTGGGATTCTGCAACACAATGGGTGTGCCTGTGTCTCCTGCATACACACTTACCACTGCAGTGATGGAGAAAAATCAGAATCTGCACCTTATCAGCCGTCGCTCCCGCTCTCAATGTTATCAGGTTCGGCACTGGCAGAATGAAGGCCTTCCCCCAGACCAGACCTCCACGGAGAACGCGATCATTGTTAAGAGTGCACACTGCTGGCCCCTGCTCATTGATCCTCAAGGGCAAGCTAATAATTGGATCTGCTGCATGGAAGGAAAGAAGCTGCACAAAGTGTTTGCTTCTGACCCCAACTACATGAGAACTGTGGAGACTGCAATCCGATTAGGAGAACCGGTTCTCATACAGGATGTAGGTGAAGGACTTGACCCAGCTCTTCGACCAGTGCTAGTCAAGAATATTAGTTCACGAGGTGGACAGGACCTTATCAAGATCGGAGACACTCAAATAGAGTACAACCACAATTTCAGGTTAGACTACAGTACAGATTTACCCTACAAGCCGCCCCACCTGATTAACTTCTCGGTGACGTCTGAGGGCCTCCAGGAGCAGCTGCTGTCCAGTGTGGTGTCACTGCAGCACCCccagctggagcagcagcaCTTCCAGCTCCTGCACAGCGTCACCGCCGACCTCTTCCTGCTCCGCCAGTTGGAGAGCCGCTCCCTGCTCCTGCTGCAGAGCACCGAGGGTAAGAGTGCTGAGGGCAGCCTGAGCTGGGTTACAGGGCTCAGGTTTAGTCCCAGCAGGCCAACAGAGAACATCTTCACAAAGCAGAAAGGACACATACTGGATGACCAAGACCTCATTGATAATCTGAGAAAATCCAGAGTCACATCAAAGGAAATTTTAAATCGGATACAAGTGTCAGAGGCAACCGAGAGGGAGATTGACAAGGTGCGCAAAAAGTACCTCCCAGTGGCCCAGCGGGGAACCCTGCTGTACTTCGTGCTGGCAGATTTGGTTCAGATCAACTACATGTACCAGTTTTCACTGGAGTGGTTCAATGAAGTGTTTGTAAAAGCAATCCAGGATGCCACCTGTGGGCAGGAATGTCCTTTACTTGACTGCTCTGAACCAGTGTCTGGCACCCTGCGGCCTCTCAGCGCTCGGAGCATGAGGAGAACGTCACGCAATGCTGAGAGGAGTGGCTCTGACACAGCAGACCTACATCTCCAGCTGCGGAAGATGATGGACACATTAGCTGAAAGCATATACAAGGAGGTGTCTCTCGCACTGTTTGCTGATCACCAGCTGTGTTTCTCTTTCATGGTGTGCGCCGGCATCATGAGGGCTAATCACAATGACAGCATGTTGGTGGAAAGCCTGGAACTGCTGCCAGAGAATGAGTGGAAGATATTCTTACATTCGTCTGTCTTAGCTTGCACGATGGATGTAAAGAAAGTGGAGCACAGAGACGGTGTGTCTGTGGAAGATTGTCCCTGCAGTCCCTGGCTTTCTCACAGCATCTGGAAGCAGTGCCAGTACCTCAGCACTCATCTCACAGCGTTCTCGATGCTGTGCACATCCCTCCAGAATAACAAACCTCAATGGACATCTTTCTTCAAAGCTAAAAACCTGTATCATTTTATGTGCAAACCTTACATTAATAATACCACTTCACAGCCAACTGAGGAGGAGAGACAACCCCTGTGTATCACAGTCTTTAAATGGGAGGGCCTCTCAGCATTTCAAAAACTCATTCTGATTAAAATTCTGAAAGCAGAGTGTTTGAATGCAGCTGTAAAAGACTTTGTAGTTGAAAAGATTGGCTCCAAATACCTGGAGAGTGGGAAGATCACCATGAGAAAGGTGTATGAAAAATCCACTGCAAACAGCCCACTCATATTTCTCTTGTCTCCAGGGATGGACCCTGCCTCTCAGCTGCTGCGGCTGTCACAGGAGGTGTCGGGGGGCGCGCTGCACCTGGACATGGTCTCGCTGGGACAGGGACAGGGCCTGCGGGCTGAGGAGCTCATCTCCAGGGCGCAGGTCCGCCAAGGCCACTGGGTATTCCTGCAGAACTGCCACCTGGCCGCCTCTTTCATGCCCCGGCTGCAATCGCTCGTCAGCTCgtTAAGACAGAAAGGATCTGATGTTGATCCTCAGTTCCGCCTGTGGCTCTCCTCTAAACCAGACCCTACATTTCCTGCTTTCATCCTGCAAAAGGGGATTAAGATTGCAGTTGAGCCCCCTCAgggcattaaaaacaaactgcttcACATGTTCAGCGGCGGCACTGGACAGGTGACGGAAAGCACCTTTGCGAAGCCTGGCTGTGGCCCCGCCTGGAAGACGCTGCTGTTCAGCCTGTGTCTCTTCCATGCTGCTGTTCTGGAGAGGAAGAAGTACGGCCCCCAGGGCTGGAACATCCCCTACACATTCATGTCATCAGACCTGGAGGTGGCTATGCTTAACTTAGAGATTTTGCTTGTGGGGTCAGAGGTGCCCTGGCCAGCACTGCGCTTCCTCACAGGGGAGATTGTGTATGGCGGCCGTGTCACTGATCCCTGGGATCGCCGATGTCTGCTCAGCATCCTGAACAGCTTCTACTCGCCCAGTGTCCTGCAGCACAGCCACGCCTACTCTGCTGATGGGGTGTACCGGGCTATCTCTGCAGAGAGCAGCCTGTCAGACTGCAGGTCCTATATTGAAAGCCTGCCTGACAGAGACGCTCCAGTGGTGCTGGGGATGGACCTGAGTGCGGAGAGTGTGCTCCTGCAGGGCCAGGCACAGCAGCTGCTCCACACCATCGTCAGCATGCAGCCCAGACTGGGCCACAGCGAAGTCACGGCCAGGGATGGGCAGAGCCAGGATGAGGTGGTCTTGGCGATGGCTGCTGACATCCTGAAGACACTGCCTGAGACTGTGGAGACTGAAGAGGCAGCAGACCGCAGCCCGAGCCTCAGGACTCTCATCACAGGACATGCCACAGCTGACCAAGGGTCTGACAGTTTGGCTCACTCTGCCTTGCTCGTCATCCTGTGTCAAGAGATCGACCGCTTTGACCACATGCTTCGGGTGATGCACACCTCCCTGCACTCGTTCTGCCGTGCTGTGAGGGGAGAAGTCCTCATGACTGAGGGGCTGGAGGAGGTGTACAGCTCCCTCCTCACAATGAAGGTCCCCACGATGTGGAAGAAATGTTCCTATGAGTCCTGCAAGCCCCTCGGTTCCTGGATCGAAGACCTAGTTCAAAGAGTGCGTTTCTTCAATGCCTGGGCAGAGCAAGTTAAAACCAGTCTCCTGCAAAGGTATGTAAAACCAGGCACTCCGCCGACTGAAGGAATGAAACCTGGAGAGAAATCCGGAACACAGACAGAGGCTAGCAGGGCGCAGCCTCGGAGCTTCTGGCTGTCTGCCTTCTTTTTCCCTCAAGGGTTCTTGACTGCAGTGCTGCAGAACTTCGCCCGTCGCCGAGGGGTTTCAGTGGACGCCCTGGTTTTCAGCCACCGTGTCCAGCCTACAGGGCAGAACCTCAAAGACTGGAGCAACACGGCCCATAAAACATTTGCCTTTGAGGGCAGTGAAGCCCCAGCGGACGGTGTGCTGGTGTTTGGGCTGTACCTGGACGGGGCCAGATGGGACCCCCTGTCCCAGACTCTGGCGGATTCGTTACCTCATCAGCAGCACTGCAGTGTGCCGGAGATCCACTTTCTGCCCTGTCAGATTTCAGATGAGAAGGCAGAGGCGGATGGAAAGCCAGCAGGCGGGCTCATGCACTATGAGTGCCCCCTGTACCCCACGCCACACAGGGCCAGCGCCCCCTCATCGCCCGGGCTCTCCTCACACTTCATCACCGCGCTTGCTCTCCCCACCACCGCCCCACCCGACCGCTGGGTCATCAGGGGCACGGCCCTCGTCTGCCAGCTCAATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004194 True 6854 mRNA 0.52 42 36921065 36960702

Neighbor

gene id symbol gene type direction distance location
AMCG00004184 LOC102789059 coding downstream 199579 36697723 ~ 36721486 (-)
AMCG00004182 ptrhd1,LOC103399259,LOC106571548 coding downstream 229704 36685290 ~ 36691361 (-)
AMCG00004183 NA coding downstream 239606 36677777 ~ 36681459 (-)
AMCG00004181 NA coding downstream 243936 36670315 ~ 36677129 (-)
AMCG00004185 NA coding downstream 257396 36646013 ~ 36663669 (-)
AMCG00004195 NA coding upstream 10689 36971391 ~ 37005951 (-)
AMCG00004196 cnih3,LOC107553421,LOC106607867,LOC107601529,LOC107732540 coding upstream 89299 37050001 ~ 37052773 (-)
AMCG00004204 NA coding upstream 317684 37278386 ~ 37288335 (-)
AMCG00004202 NA coding upstream 526255 37486957 ~ 37512998 (-)
AMCG00004201 NA coding upstream 564077 37524779 ~ 37528763 (-)
G6374 NA non-coding downstream 209 36912238 ~ 36920856 (-)
G6326 NA non-coding downstream 140374 36780478 ~ 36780691 (-)
G6309 NA non-coding downstream 155256 36765572 ~ 36765809 (-)
G6243 NA non-coding downstream 363734 36556106 ~ 36557331 (-)
G6241 NA non-coding downstream 365957 36553907 ~ 36555108 (-)
G6384 NA non-coding upstream 67326 37028028 ~ 37028244 (-)
G6437 NA non-coding upstream 354934 37315636 ~ 37318149 (-)
G6445 tnfrsf21,LOC102783898 non-coding upstream 451987 37412689 ~ 37416547 (-)
G6462 NA non-coding upstream 537496 37498198 ~ 37498446 (-)
G6491 sf3b6,SF3B6,pm14 non-coding upstream 606629 37567331 ~ 37569793 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other downstream 133943 36783743 ~ 36787122 (-)
AMCG00004189 NA other downstream 142003 36769048 ~ 36779062 (-)
AMCG00004178 NA other downstream 380224 36495772 ~ 36540841 (-)
AMCG00004143 mut,LOC107726528,LOC107697172,LOC107726757 other downstream 1506619 35344663 ~ 35414446 (-)
AMCG00004132 NA other downstream 1957180 34954706 ~ 34963885 (-)
AMCG00004203 NA other upstream 363308 37324010 ~ 37381953 (-)
G6441 NA other upstream 407283 37367985 ~ 37368822 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other upstream 2881233 39841935 ~ 39849123 (-)
AMCG00004302 NA other upstream 5104287 42064989 ~ 42067664 (-)
AMCG00004313 NA other upstream 5416024 42376726 ~ 42531006 (-)

Expression


Co-expression Network