AMCG00004229


Basic Information

Item Value
gene id AMCG00004229
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 39302709 ~ 39312703 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004229
ATGCTGTTTATCAGCACCGCACTGGTGACTCATGCGTTTGAAAAGCTGTGCGCCCCAGGACTGCAAAGCGAGCTTGACCAGGAGTACCAAGACAAATTCAGAAGACTTCCAGTGGAGATCCAGGAGTTCGTGCAGGAGGCAACCAAAGGGAACGGAGACCACTGTACCGTCTCTTTTTCCATGGCTTCTGACAGTGGAAAACTCAACCACAAGACCCACCAATCTGAGGAGGATATAGAAGAGGAAAGCCCAGAAAAAGTCTTTGACACACCACTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004229 True 279 mRNA 0.50 2 39302709 39312703

Neighbor

gene id symbol gene type direction distance location
AMCG00004228 NA coding upstream 9476 39249462 ~ 39293233 (+)
AMCG00004225 NA coding upstream 339074 38954137 ~ 38963635 (+)
AMCG00004224 crls1,LOC107663140,LOC107737905,LOC107678734,LOC103476593 coding upstream 447392 38850789 ~ 38855317 (+)
AMCG00004223 mcm8,LOC107738559 coding upstream 452698 38840016 ~ 38850011 (+)
AMCG00004222 NA coding upstream 468741 38825821 ~ 38833968 (+)
AMCG00004230 NA coding downstream 84800 39397503 ~ 39436248 (+)
AMCG00004233 NA coding downstream 128423 39441126 ~ 39442709 (+)
AMCG00004231 lamp5,LOC106571558 coding downstream 132496 39445199 ~ 39453488 (+)
AMCG00004240 NA coding downstream 246789 39559492 ~ 39559927 (+)
AMCG00004235 NA coding downstream 280240 39592943 ~ 39598254 (+)
G6684 NA non-coding upstream 154415 39122547 ~ 39148294 (+)
G6676 NA non-coding upstream 335819 38966678 ~ 38966890 (+)
G6667 NA non-coding upstream 375679 38926738 ~ 38927030 (+)
G6653 NA non-coding upstream 443704 38858118 ~ 38859005 (+)
G6627 NA non-coding upstream 525209 38775953 ~ 38777500 (+)
G6769 NA non-coding downstream 455681 39768384 ~ 39768607 (+)
G6771 NA non-coding downstream 457762 39770465 ~ 39770698 (+)
G6807 NA non-coding downstream 631797 39944500 ~ 39945055 (+)
G6819 NA non-coding downstream 702564 40015267 ~ 40034323 (+)
G6840 NA non-coding downstream 775905 40088608 ~ 40088914 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 1454989 37832623 ~ 37847720 (+)
G6369 NA other upstream 2302551 36999357 ~ 37000158 (+)
G6328 NA other upstream 2410963 36861547 ~ 36891746 (+)
G6314 NA other upstream 2528186 36774001 ~ 36774523 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 2604824 36687630 ~ 36697885 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 1013707 40326410 ~ 40341235 (+)
G7094 NA other downstream 2146873 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 2897727 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 3376076 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 5305482 44618185 ~ 44640732 (+)

Expression


Co-expression Network