AMCG00004249


Basic Information

Item Value
gene id AMCG00004249
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 40010525 ~ 40012375 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004249
ATGATGGTGTTCTTGTTACTTCTTCTGCAAACTGCTCTTTGTATAGTTAGCACAGCCGACCAGCCAGACCAGACGGTGTGCACAGGCAGCGCATGTTACACTTTACATCTGCGCAAAAGCACGTTCACTGAGGCTCAACACAATTGCACACACAACGGGGGGAACTTGGTGACGGTGAAGAGCCATGAAGAAGCTTCGGAGGTAAATTCTGTGCTGTCCCGGATCCGGGAAGGCCAGACAAGTCATGACTTGAAGTTTTGGATTGGACTGACGCTGAGAAAGGGCGAGTGCACGTCTGCGGATTCAACTCTGAAAGGCTTTACCTGGGTGTCTGGGAGCTCGGACACACCGTATTCAAACTGGGAGGTGGAACCGCCAGGCACCTGCACAGAAGAGAGGTGTGTAGCCATACATTACGTGTTGTCTCCTCCAAATAGTGATAGTTTTGGTTGGATGGACAGCTCCTGCAAAGATGCAGCTGGCTATATGTGCAAGTTTAATTTTAAGGGCATGTGTAAAACTATACCTGTGGCAGGGGCGGGTGAAGTGCACTACACACTGACCTTTGCAACGTTTCGCCTAAGCGACAGCAATGCTTTTTTACCTATGGTACCTCACGGGACTATTGCAACGGTGAAGTGTGCCAATACCGACAATGAAATCAGTGCTTATTGCTTGCCTAATGAAGGCTTCTTCGGCTGGAGTCCCCCAGGTCCGTTGTGTGACTCTGTGAAACAAGGCTGCAGGTTTGCTAATGGGGGCTGCGACCATCGCTGCGTAGTCGGTGGAAACGGGGATGCGCGCTGTGAATGTGAAGACGGTTATGCACTCGTTGCCGACCAGGTGACATGTGTCCAAATCGACTATTGCCAGCATGCTGGGTGTGAATACAGGTGTAAATCGGATAGGGGACGATTTCACTGCTTGTGCCCAGACGGGTTTCAACTCGCCCCAAACGGCCTCGGTTGCATCGATGTGGACGAATGCGCATCCAGGCCCTGTGAACAACTGTGCGCAAACGGCCAGGGCAGTTTCACGTGTTCGTGCAGAGACGGGTACGTCATGGTTAATGGGACCTGCCACGATATAGACGAGTGCATGGCATCGAGGTGTGATCAAGGCTGCCTCAATGCGCCGGGATCTTTCTCTTGTTACTGCCTGGGGGGGTTCGAGATATCAGAGGATGGGCGCAGCTGCTTGGATATTGACGAGTGCCTCAACAACCCCTGTGAGCAGAGGTGCGCAAACACTGTCGGCAGCTTTGAGTGCTCTTGCAAACAACATTACAAGGTGGCATCCGACGGAATAGCATGCATCCCTAACCCAGTAAGAACCTCAGCTACTGCCAAACCTATAGATGAGAGAGACCACACTACCCGGCATACAGATGGCATCTACAGGGTGCCATCTGAGACCATGGTGACTTTAGCAGCACGAACCCCAACAGAATATATGAAGGGAGACAGTGAAGAAAAGACAACAGGTTTTATAAACGAGGCCTTGCTCAGCTACACTAGCGCACCAGTTCAAAAGTCTTCCCACTCCACAGCCCCCACCGAGAAAACGGGTGAAAATGGCAACAATGTGCGTCAGATACACAATGCAAGTCAGACATGGATACTTGCTTCTGTAATGTCGGCATTGGTTGCCTTGTTACTTTTAATTGCTGTTGTTTCGGCTGTCGTGATCTGTCGGCGTAACTGTATCCAAAGAGAAACCAAAAAGGAAAGCACGGCCACAGACAACTACTGCTGGGTGGGAAACGAGACGCATACCTCCAAGGAGGGAGGAGGTCGTGATGCTGCAGCCCAGGAAGCTCTGTGTAACTTAGGAGACGAGTCTGACGTGTAA

Function

GO: NA

KEGG:

id description
K06702 CD93; CDW93 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004249 True 1851 mRNA 0.51 1 40010525 40012375

Neighbor

gene id symbol gene type direction distance location
AMCG00004246 tmem151b coding upstream 117699 39885665 ~ 39892826 (+)
AMCG00004236 hsp90ab1,hsp90bb coding upstream 163826 39839368 ~ 39846699 (+)
AMCG00004235 NA coding upstream 412271 39592943 ~ 39598254 (+)
AMCG00004240 NA coding upstream 450598 39559492 ~ 39559927 (+)
AMCG00004231 lamp5,LOC106571558 coding upstream 557037 39445199 ~ 39453488 (+)
AMCG00004250 NA coding downstream 9254 40021629 ~ 40030108 (+)
AMCG00004248 NA coding downstream 25336 40037711 ~ 40054452 (+)
AMCG00004251 disp1 coding downstream 47571 40059946 ~ 40083528 (+)
AMCG00004254 aida coding downstream 172502 40184877 ~ 40194871 (+)
AMCG00004256 NA coding downstream 208149 40220524 ~ 40228831 (+)
G6807 NA non-coding upstream 65470 39944500 ~ 39945055 (+)
G6771 NA non-coding upstream 239827 39770465 ~ 39770698 (+)
G6769 NA non-coding upstream 241918 39768384 ~ 39768607 (+)
G6684 NA non-coding upstream 862231 39122547 ~ 39148294 (+)
G6676 NA non-coding upstream 1043635 38966678 ~ 38966890 (+)
G6819 NA non-coding downstream 2892 40015267 ~ 40034323 (+)
G6840 NA non-coding downstream 76233 40088608 ~ 40088914 (+)
G6847 NA non-coding downstream 97825 40110200 ~ 40113951 (+)
G6850 NA non-coding downstream 136587 40148962 ~ 40198962 (+)
G7048 NA non-coding downstream 965624 40977999 ~ 40978319 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 2162805 37832623 ~ 37847720 (+)
G6369 NA other upstream 3010367 36999357 ~ 37000158 (+)
G6328 NA other upstream 3118779 36861547 ~ 36891746 (+)
G6314 NA other upstream 3236002 36774001 ~ 36774523 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 3312640 36687630 ~ 36697885 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 314035 40326410 ~ 40341235 (+)
G7094 NA other downstream 1447201 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 2198055 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 2676404 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 4605810 44618185 ~ 44640732 (+)

Expression


Co-expression Network