Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004250 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 40021629 ~ 40030108 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005540 | hyaluronic acid binding | molecular_function |
| GO:0031406 | carboxylic acid binding | molecular_function |
| GO:0043177 | organic acid binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004250 | True | 255 | mRNA | 0.53 | 2 | 40021629 | 40030108 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004249 | NA | coding | upstream | 9254 | 40010525 ~ 40012375 (+) |
| AMCG00004246 | tmem151b | coding | upstream | 128803 | 39885665 ~ 39892826 (+) |
| AMCG00004236 | hsp90ab1,hsp90bb | coding | upstream | 174930 | 39839368 ~ 39846699 (+) |
| AMCG00004235 | NA | coding | upstream | 423375 | 39592943 ~ 39598254 (+) |
| AMCG00004240 | NA | coding | upstream | 461702 | 39559492 ~ 39559927 (+) |
| AMCG00004248 | NA | coding | downstream | 7603 | 40037711 ~ 40054452 (+) |
| AMCG00004251 | disp1 | coding | downstream | 29838 | 40059946 ~ 40083528 (+) |
| AMCG00004254 | aida | coding | downstream | 154769 | 40184877 ~ 40194871 (+) |
| AMCG00004256 | NA | coding | downstream | 190416 | 40220524 ~ 40228831 (+) |
| AMCG00004255 | NA | coding | downstream | 205420 | 40235528 ~ 40248464 (+) |
| G6807 | NA | non-coding | upstream | 76574 | 39944500 ~ 39945055 (+) |
| G6771 | NA | non-coding | upstream | 250931 | 39770465 ~ 39770698 (+) |
| G6769 | NA | non-coding | upstream | 253022 | 39768384 ~ 39768607 (+) |
| G6684 | NA | non-coding | upstream | 873335 | 39122547 ~ 39148294 (+) |
| G6676 | NA | non-coding | upstream | 1054739 | 38966678 ~ 38966890 (+) |
| G6840 | NA | non-coding | downstream | 58500 | 40088608 ~ 40088914 (+) |
| G6847 | NA | non-coding | downstream | 80092 | 40110200 ~ 40113951 (+) |
| G6850 | NA | non-coding | downstream | 118854 | 40148962 ~ 40198962 (+) |
| G7048 | NA | non-coding | downstream | 947891 | 40977999 ~ 40978319 (+) |
| G7078 | LOC103376870 | non-coding | downstream | 1265190 | 41295298 ~ 41364066 (+) |
| AMCG00004210 | fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 | other | upstream | 2173909 | 37832623 ~ 37847720 (+) |
| G6369 | NA | other | upstream | 3021471 | 36999357 ~ 37000158 (+) |
| G6328 | NA | other | upstream | 3129883 | 36861547 ~ 36891746 (+) |
| G6314 | NA | other | upstream | 3247106 | 36774001 ~ 36774523 (+) |
| AMCG00004179 | ptrhd1,LOC103399259 | other | upstream | 3323744 | 36687630 ~ 36697885 (+) |
| AMCG00004257 | dusp10,LOC106607590 | other | downstream | 296302 | 40326410 ~ 40341235 (+) |
| G7094 | NA | other | downstream | 1429468 | 41459576 ~ 41507231 (+) |
| AMCG00004304 | NA | other | downstream | 2180322 | 42210430 ~ 42216362 (+) |
| G7329 | fabp7,LOC108247051,LOC104945778 | other | downstream | 2658671 | 42688779 ~ 42691109 (+) |
| AMCG00004355 | hyou1,LOC100380749 | other | downstream | 4588077 | 44618185 ~ 44640732 (+) |
