AMCG00004254 (aida)


Basic Information

Item Value
gene id AMCG00004254
gene name aida
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 40184877 ~ 40194871 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004254
CGGTATCCCAGGTTTTGCGCCGCTGTGGCTTTAATAACGATGGGGGTGACGCACACTTGGAGGTGGGACTTCCTTCATGCCAGCGCAAGCTAGGTTGAGCAGACAGAAGGGCTTGGTCAGTGCGGGGTGTTGGTAGCACCGGTTAGCCTGCATGTCTGTACCTGGCACACGATCATGCACAGAGGAAACTAGAGCCCATGTACCCTGCCATGCTCACCTGAGAACACATGGTGCAACAGCAGCTTGTGAAAATGTCCGATGTGAATAAGACCATCCAGAAATGGCAGGCGAGTTTTAAAAAGGGAACGGACTTTGATTCGTGGGGACAGTTAGTGGAAGCAATTGATGAATACCAAATacTTGCAAGGCAGCTCCAGAAAGAAGTTCAGTCCTCTAATCCGTCGGATTTCACAGAAGATCAAAAGAAAACTTTAGGAAAATTTGCGACATGCCTTGAAATGAGAAGTGCAGCCTTGCAGGAGGAGTTCAAGCTGGAAGATCTCAAGAAACTGGAACCCATTATTAAGAATATTCTTACTTACAACAAAGATTTTCCCTTTGATGTGCAGCCTGTGCCTTTAAGGAAAATTCTAGCCCCCGGCGAGGAAGAGAATTTGGAAGTGGAGGAAGAAGATGATACAGCCACTGGGGCAGGCTCGCCCGATTCCTTCCCCTCCAGAGTCCCAGATCTAAATGGCATTGATCTGAACCCAGTGCAAGACACTCCAGTGGCCACCAGAAAAGAAGACAcctacattcattttaatgtggaTGTAGAAATCCAGAAACATCTGGAGAAGCTATCTAAAGGTGCAGCTATATTCTTTGAATTCAAGCACTATAAACCCAAGAAAAGGTTTACCAGTACAAAATGTTTTGCCTTCATGGAAATGGATGAGATCAAGCCTGGTCCCATTGTTATAGAACTGTACAAGAAGCCAACAGATTTCAAAAGGAAGAAACTCCACCTTTTGACGAAGAAACCACTCTATCTTCACCTCCAGCAGACCTTGCACAAAGACTAAATGGGGTTTCCCAGGGTGCACTTCAATGTGTGAATGAACCATCAAACGCCGCTCCTggctgctgtgtctgtgtgccggTGGTCACTCTGCAAAACTACTATACATTTCCCTCCCGTTTACTCGGCAATACTAAACCTAGCTAACTGAGCAACCGTTCTGCCACTCATTAACTCCCTGGAGCAGTTCTTCAGCTATTGAGCGTGCTTGATTTATGTGACTCAATGGCTGTCCTGTTCATGCAATACCTACCAGCCAGAGTGGTTGAAATGCTTGGTGAAAGGCCTTCAGATACAGGCTACATACCTAACTGCTTTATACTAAATTCTGTGAAGAGGGAAGAGCTACGTGAGCTAATGGTAAGTGGGAGTGAACACCAGCATCCTCTTGGTGGACTTCTAAAAACATTCCAGTAACCAGCTTGACAAGGATCATAATGCCCACTCCCACCCTCCCCTCATCAGCCAATGAGAACGCTCCTATAGCACCTCATGACTAATGCAAAGGGGGCATGGCACACTTTCTAACACATAGATAAAGGTATGTTTTGGAaacacagttttatatatatatatatatagagagagagagaatgggttCTCTCTGTGTGGCTTCTCACAGTGTTGTCTGACACACTTAGTACTTTGTGTACATGGAGCATACTTTGATATGCTACATAGGTACCTATAAAAAGGGCTAGAATTGATCAGATTTCCTAGGATGTCGGTAGCATATATGGATTGTCTTTTTAATCTGCTTAAGCAAAACACGATCCCTTTTTTGTAAACCtatgaagcagaaaaaaatattaaatgaaaccaTCTGCCAGCCAAGTGAAGAAACTATTTGCTACCTGcagattttaaaagtattttattattctgtacaCTAAGAGATGCACATATTTGATAAACATTACCTTTGCCTGATTGCTTTGATTGATATtgcagccatttaaaaaaaaatcccctgtAGCCAACGATAAAGGAATGCTGCTTTGTACAACTGGTTATAAATCGCTGTATAATACACACAATAGTGCTTGGAGATTATAAGGTATCACTGATCACAAAAATATCTGCATCAGAAAGTATAGTGATGGTATTTTGAAGTGTTTGAATgatacttttgttttgtgaatcaCAACACGGACTGTGCTTTTATAGCATTTGTATGTAAACAGGATGAATTTCAAAGTTTGTTCCAGAGCAAGTGTTTCTTAATGTACTGCTAAAGTTGCAAATCTAAGATGCAAAAGAGGAAGTAgatgattcttttttttatttttattgtattttatttttattttggagttCCCAGATGTGCagcaaatatttgtaagaaaccTAGCCTGCATTTATCATTTTTGTGTCCATGTTTCTGTGATGTTATAGGTAGCTCATCCTGAATACTCAATACTAAAATCGGCAGAACACTAAAAAAAGACTGGTTCTGATCCCTACGCGGCGGATGTCCGGACAGCATATACATATCTCATTGTAATCCATGGACTCCAAAAGCAATTCTAATAGGCATGCACAGAAACAACCTGAAACGTGTGGTTTGGATGACTAGGAGATGTCGCGTGAAAACCATTTGTCTtgaagtttttttatttgtttttgtttttttaagtattgaGATTAGCAGTCTTTATTCTGAGTGGTACATGCTCACTagttttttataaaatgtgtactAAACtctaaataaatcacaattgtttc

Function

symbol description
aida Enables phosphatidylinositol binding activity. Involved in negative regulation of JUN kinase activity and negative regulation of determination of dorsal identity. Acts upstream of or within determination of ventral identity. Located in membrane. Is expressed in brain and somite. Orthologous to human AIDA (axin interactor, dorsalization associated).

NR:

description
PREDICTED: axin interactor, dorsalization-associated protein isoform X3

GO:

id name namespace
GO:0030178 negative regulation of Wnt signaling pathway biological_process
GO:0046329 negative regulation of JNK cascade biological_process
GO:0048264 determination of ventral identity biological_process
GO:2000016 negative regulation of determination of dorsal identity biological_process
GO:0043496 regulation of protein homodimerization activity biological_process
GO:0043508 negative regulation of JUN kinase activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004254 True 2749 mRNA 0.41 9 40184877 40194871

Neighbor

gene id symbol gene type direction distance location
AMCG00004251 disp1 coding upstream 101349 40059946 ~ 40083528 (+)
AMCG00004248 NA coding upstream 130425 40037711 ~ 40054452 (+)
AMCG00004250 NA coding upstream 154769 40021629 ~ 40030108 (+)
AMCG00004249 NA coding upstream 172502 40010525 ~ 40012375 (+)
AMCG00004246 tmem151b coding upstream 292051 39885665 ~ 39892826 (+)
AMCG00004256 NA coding downstream 25653 40220524 ~ 40228831 (+)
AMCG00004255 NA coding downstream 40657 40235528 ~ 40248464 (+)
AMCG00004265 NA coding downstream 376089 40570960 ~ 40598834 (+)
AMCG00004264 NA coding downstream 411583 40606454 ~ 40618190 (+)
AMCG00004266 NA coding downstream 527292 40722163 ~ 40729804 (+)
G6847 NA non-coding upstream 70926 40110200 ~ 40113951 (+)
G6840 NA non-coding upstream 95963 40088608 ~ 40088914 (+)
G6819 NA non-coding upstream 150554 40015267 ~ 40034323 (+)
G6807 NA non-coding upstream 239822 39944500 ~ 39945055 (+)
G6771 NA non-coding upstream 414179 39770465 ~ 39770698 (+)
G7048 NA non-coding downstream 783128 40977999 ~ 40978319 (+)
G7078 LOC103376870 non-coding downstream 1100427 41295298 ~ 41364066 (+)
G7084 NA non-coding downstream 1172274 41367145 ~ 41368478 (+)
G7102 NA non-coding downstream 1328182 41523053 ~ 41529308 (+)
G7101 NA non-coding downstream 1410239 41605110 ~ 41606759 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 2337157 37832623 ~ 37847720 (+)
G6369 NA other upstream 3184719 36999357 ~ 37000158 (+)
G6328 NA other upstream 3293131 36861547 ~ 36891746 (+)
G6314 NA other upstream 3410354 36774001 ~ 36774523 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 3486992 36687630 ~ 36697885 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 131539 40326410 ~ 40341235 (+)
G7094 NA other downstream 1264705 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 2015559 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 2493908 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 4423314 44618185 ~ 44640732 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017725 aida coding NC_007131.7 CM002904.2 51730658 ~ 51753885 (+)