AMCG00004255


Basic Information

Item Value
gene id AMCG00004255
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 40235528 ~ 40248464 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004255
ATGACGGCCGAGTCGCATCCCCAGCCCTGCCGGCTCCACGCACACCCTGGGCCACTGGACCTTCCTCATCCCCTCCGGTACCTGCTGTGGACGCAAGTGCTGTTATTGATGGTGGGAGAGGCATGTGCGCACCCCCAGTGCTTGGACTACCGACCCCCATTTAAGCCCCATTACCACCTGGAGTTCTGCACTGAGTATGAGAGTTATGGGTGCTGTGACCAGACCACGGACAACGCCATTGCAGAGAGATACTGGGACATCATGGACTTATATGACATCCAGGGGTACGAGTTGTGCGGGGGGTTGGTCAAAGACATCCTCTGCCAGGAGTGCTCTCCCTATGCTGCTCACCTGTACGATGCAGAGAATCCTTATACTCCCATAAGGGACCTCCCAGGCCTCTGCTTCGACTACTGCTCCGAGTTCCACATCAAGTGCCACTCCGTTGTGAAGCTTCTGACGGACGACAAGAAGATCCTGGAGTCCTGCGAGAAGGACAGGTACATGTTTTGCAACCTCATCAACCTGCCAGACCAGGACTACTGTTACCCCAAAGTGCTGGAGAACATGGTTCTCAACCGCAACCTGGGCACCATGGTTCAGGATAGGAATGGCTGCTTGCAACTGTGCCTGACAGAGGTGGCCAACGGGCTGAGGAACCCTGTGCTGATGCTGCACAGCAACGATGAGACCCACCGCATGTTCGTGGCTGAACAGCTGGGCTTTGTGTGGGTCTACCTGCACAATGGCAGCCGTGTGGAGGAACCTTTCCTGGACCTCAGTGGCATGGTGCTGACCACCCCTTGGTTTGGGGATGAGCGAGGCTTCCTTGGGCTTGCCTTTCACCCGCATTACAGAAACAACGGGCGTTTCTTTGTCTACTACTCCGTCTTGGTAAATGACAATGTCGAGAAGATCAGGATCAGTGAGATGAAGGTGTCCTCCTATGATATGAACAAGGCAGATCCCCATTTTGAAAGGGTTATTTTGGAAATTGAAGAACCTGCAGCTAATCATAACGGTGGACAGCTATTGTTCGGTCTTGATGACTACTTGTATGTATTCACTGGAGATGGGGGGAAAACTGGGGACCCTTTTGGGAAGTTCGGCAATGCTCAAAACAAGAGTGCTCTTTTGGGAAAAGTGTTACGCATTGATGTGGATGTCAGCGACATGGATGGAAAGCCATACAGGATCCCAGATGACAACCCTTTCATTTCTGACCAGAGTGCTCGACCGGAGGTGTACGCTTATGGAGTGAGGAACATGTGGCGTTGCTCTGTGGACCGCGGAGAGCTGGTCACTCAGAGAGGAAGGGGAAGGATATTCTGTGGGGATGTGGGCCAGAACAGATATGAGGAAATTGACATAATCGTGAAAGGAGGCAATTATGGATGGAGGGCAAAAGAGGGATTTGAGTGCTATGATGATAAGTTGTGTCACAACTCATCGTTAGATGACATCCTTCCAATTTTTGCATATAGTCACCGTGAAGGCAAATCTGTCACAGGGGGATATGTGTACAGAGGGTGTGAGTCACCTAATCTTGACGGCTTGTACTTCTTTGGGGACTTCATGAATGGtCGACTTATGGCATTACAGGAAGATAAGATGACAGGGACCTGGGAAGAGAAGGGCATCTGCATGGGTGACACGAAGACATGCTCCTTTCCTGGGCTGATCAATCAGCACCATGTGTTTATTATCTCTTTCGCTGAGGATGAAGCAGgtGAGCTGTACTTCATGGCTACTTCAATGCCAACCTCTGTATCCCCATTTGGAACAATATACAAATTTGTAGACCCATCAAGGTATGTATTTTAG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004255 True 1824 mRNA 0.51 7 40235528 40248464

Neighbor

gene id symbol gene type direction distance location
AMCG00004256 NA coding upstream 6697 40220524 ~ 40228831 (+)
AMCG00004254 aida coding upstream 40657 40184877 ~ 40194871 (+)
AMCG00004251 disp1 coding upstream 152000 40059946 ~ 40083528 (+)
AMCG00004248 NA coding upstream 181076 40037711 ~ 40054452 (+)
AMCG00004250 NA coding upstream 205420 40021629 ~ 40030108 (+)
AMCG00004265 NA coding downstream 322496 40570960 ~ 40598834 (+)
AMCG00004264 NA coding downstream 357990 40606454 ~ 40618190 (+)
AMCG00004266 NA coding downstream 473699 40722163 ~ 40729804 (+)
AMCG00004268 ints7 coding downstream 562922 40811386 ~ 40824981 (+)
AMCG00004267 lpgat1,LOC106607581 coding downstream 602767 40851231 ~ 40861765 (+)
G6850 NA non-coding upstream 36566 40148962 ~ 40198962 (+)
G6847 NA non-coding upstream 121577 40110200 ~ 40113951 (+)
G6840 NA non-coding upstream 146614 40088608 ~ 40088914 (+)
G6819 NA non-coding upstream 201205 40015267 ~ 40034323 (+)
G6807 NA non-coding upstream 290473 39944500 ~ 39945055 (+)
G7048 NA non-coding downstream 729535 40977999 ~ 40978319 (+)
G7078 LOC103376870 non-coding downstream 1046834 41295298 ~ 41364066 (+)
G7084 NA non-coding downstream 1118681 41367145 ~ 41368478 (+)
G7102 NA non-coding downstream 1274589 41523053 ~ 41529308 (+)
G7101 NA non-coding downstream 1356646 41605110 ~ 41606759 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 2387808 37832623 ~ 37847720 (+)
G6369 NA other upstream 3235370 36999357 ~ 37000158 (+)
G6328 NA other upstream 3343782 36861547 ~ 36891746 (+)
G6314 NA other upstream 3461005 36774001 ~ 36774523 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 3537643 36687630 ~ 36697885 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 77946 40326410 ~ 40341235 (+)
G7094 NA other downstream 1211112 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 1961966 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 2440315 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 4369721 44618185 ~ 44640732 (+)

Expression


Co-expression Network