AMCG00004263


Basic Information

Item Value
gene id AMCG00004263
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 40441901 ~ 40453529 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004263
CTTTGTAATTGCTGCGTGGTGGGGGCGTGTCCTCTGGCCTGTGCGTGGGGACGTCTGGGAGCTGTTCCTGACGCGGTGTCCGGCCGGGGAAGTTTCTTGCGACACGTTTAGTTTTTGCGTCTTTGTTGCAGCTACCTGTGCGCCACATTTTTGGTTACATTGTATATTAACTGCGACTTTGCCAAATATAACAACTTGTCTTGTCAGTGGTGACTATAAAATGAACCGCATATCAGATCTAATTGATTTATGTGCtcaaaacaaaaaggctttGCTTTACGCTGCAGCAGTGGGGTTGGGCACGTTAGGACTCGGCTTGTTGTTGAAATCACTGCACAAGAAAAGTCCCAGAAAAGTTTCCCAAGTGGGAGTCGTGTCGGAGCTGATTATCTATGCTGTCAAATCCTGCAAAGGACTCCATGTGCAGAAAGCCGAATGCCTGGAAATGGGCCTCAAATATGGGGAGCTTAAGGACAgACACTGGCTGGTGATCACAGAAGATGGTCACCAAGTAACCGGTAGGCAGGAGCCTCGACTGGTGTTGATGTCAGTAACCTCTAGCGATGAAAGCCTGTGTCTGAAGGCCCCAGACATGGAGGAGCTGAATATCCCCCTTAAGCTCTCCAACAAGAATCCAATAGTAAACTGCAGGGTTTGGAGTAAAGATATTCAGGGCAGAGATTGTGGAGATGAGGCCTCTCTCTGGATTACACAGTACCTGGCTGGAGAGAGAACCTACCGACTGGTGCAGTTCGAGTCTGATATGAAACCTCGAAGACACCATGAGCATGGTAGCAAGGTTGTGTATCCTGATGATAGCCCTATAATGTTGCTGTCGGAGGCCTCTCTAGAGGACCTCAACACAAGGCTGGAGCGGAAAGCCACAGTCGGAAACTTCAGGCCGAGTATTGTCGTCTCTGGCTGTGAAGCATTTGCAGAGGACTCCTGGGATGAGATACAAATTGGCAGTATGAGGCTCTACCGTGTGATGGCCTGTAGCAGGTGTATTTTCACAACTGTAGACCCTGAAACTGGTGTGATTGACAGGAAGGAACCATTGGAAACACTTAAGAGCTACCGGCTGTGTGACCCATCTGAGAagcacatttataaaacagctcCACTGTTTGGACAGTACTACCGTGTTGACAAAACTGGAATCCTTCAAGTTGGAGATCCTGTGTACAAGATAACTTACTGAATGAACAAGGCTGCCCATTACCTTGATTTAATTGCTTTCTCATAGACCACATGCCTTGATTGTCTGCTGCTAGCTTCCTTGTTTGTCCTCTTTATAATCCACacactttcttctaataaaattaacatatttgtttGGATTTCACCCAGAGGTGTAATATTATTTTGGATTGTATTTACTGTGGGGCAAGTCAACTTCCTATTATTCTGTCTGAGGAattctttcttttgttattataatagtGAATGTTTTTCAGACTCTGTGATGTGTTTGAAATACCATGAAAACCAgggaaattattacttttagAGCCAAGAACAAGACCATTCTGTTACAAATAGCTGATGTCCACACTAcaataattaactttaaaactAAGATTGATTTGCTCATTATTCTATATATCTCATAAGCTTAATGGAAAGTTctcccaaatgtattttctttgataATTACAGAGGAGGAAGTTCTTGTAATGTGTTCACTGACTGtctaatttaagtaatttataaagaaaaaaaaaatctaatgtgATTTATCTGTGTAAAATACCATCAGTATTGACATGTATATGTACTTTTACTAAATTAATTCtgcctttcaaaataaacattgttgcAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004263 True 1823 mRNA 0.42 7 40441901 40453529

Neighbor

gene id symbol gene type direction distance location
AMCG00004261 NA coding downstream 7058 40431859 ~ 40434843 (-)
AMCG00004259 NA coding downstream 223437 40197502 ~ 40218464 (-)
AMCG00004258 LOC106512272,LOC104967796 coding downstream 257611 40174572 ~ 40184290 (-)
AMCG00004260 NA coding downstream 268426 40168637 ~ 40173475 (-)
AMCG00004253 NA coding downstream 277567 40102739 ~ 40164334 (-)
AMCG00004262 slc35f6,LOC106571211 coding upstream 61 40453590 ~ 40535830 (-)
AMCG00004273 ezr,LOC106607585 coding upstream 166401 40619930 ~ 40637476 (-)
AMCG00004269 rsph3,LOC107580271 coding upstream 198869 40652398 ~ 40660287 (-)
AMCG00004271 NA coding upstream 212596 40666125 ~ 40693787 (-)
AMCG00004274 NA coding upstream 257167 40710696 ~ 40715249 (-)
G6872 NA non-coding downstream 315109 40126548 ~ 40126792 (-)
G6838 NA non-coding downstream 363618 40078017 ~ 40078283 (-)
G6822 NA non-coding downstream 407578 40015234 ~ 40034323 (-)
G6818 NA non-coding downstream 427642 40010411 ~ 40014259 (-)
G6793 NA non-coding downstream 600819 39839168 ~ 39841082 (-)
G6939 NA non-coding upstream 145425 40598954 ~ 40602815 (-)
G6974 NA non-coding upstream 221642 40675171 ~ 40696315 (-)
G7023 NA non-coding upstream 428279 40881808 ~ 40883167 (-)
G7035 NA non-coding upstream 462920 40916449 ~ 40921474 (-)
G7104 NA non-coding upstream 840647 41294176 ~ 41364065 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other downstream 592778 39841935 ~ 39849123 (-)
AMCG00004203 NA other downstream 3059948 37324010 ~ 37381953 (-)
G6441 NA other downstream 3073079 37367985 ~ 37368822 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other downstream 3654779 36783743 ~ 36787122 (-)
AMCG00004189 NA other downstream 3662839 36769048 ~ 36779062 (-)
AMCG00004302 NA other upstream 1611460 42064989 ~ 42067664 (-)
AMCG00004313 NA other upstream 1923197 42376726 ~ 42531006 (-)
AMCG00004336 NA other upstream 2949424 43402953 ~ 43450255 (-)
G7608 NA other upstream 4067385 44520914 ~ 44522213 (-)
AMCG00004364 NA other upstream 4086634 44540163 ~ 44561575 (-)

Expression


Co-expression Network