AMCG00004265


Basic Information

Item Value
gene id AMCG00004265
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 40570960 ~ 40598834 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004265
GCAAAAGCTGCACGTCAAAGGAAAGGAGGCGGTTCTGCGCGCCTGTCCTTTAAATACTGAATCAAACATCTTCTCAAACGTGGGGattaaaaacgaaaaaaaaacgATCCAGAAatggacagacaggcagagcaAATACTAATGAGCGGCGGGGCGGCAGCGCAGCCGGCGGTCTCTACGCCTATGCTCGGGCCGGAGGAAGCGGCGGGGCAGCGGGGGAAACAGCAGAGGAGCAGCAAGTCCAACACATGCAAACTTCTCACCGGGGTGGTACTGCTTTGTTTGCTGATCATAATCCTGGCCATAATTTTTGCAGTGAAACGCCGCTGTCCTGATGAAGGCAAAAGTTGCAAGAACAGATGTACTTTTGACACCCGACACAAATATGACGTGTGCCGATGTGACAGTTTGTGCTTAAAGGAGGGAAACTGCTGTCTGGACTTCCAGGAAGTGTGTCTGGAGCCAACTCAGCTCTGGACGTGTACCAAGTTCCGTTGTGGTGAAAAAAGGCATCCGCACAGCCTTTGTTCCTGCTCTACTGATTGTCTGAAAGTAGGAGATTGCTGTGCAAACTATAACAGTATTTGTAAAGGTGAGAAAAGCTGGCAGGAGCAAGACTGTGAAGAAACTGACCTGGCACAATGTCCATCAGGATTTTCAAAACCCCCTGTTATCCTGTTTTCATTGGATGGCTTCAGAGCTGAATACTTGAAAAAATGGGGTCGTCTTATGCCAGCAATAAGCAAATTAAaaaaatgtggAACTTTTACTGACATGAGACCAGTTTACCCTACAAAGACCTTTCCCAATCATTACACCATTGTTACAGGACTTTATCCAGAATCTCACGGCATTGTGGATAACCATATGTATGACGTGACTCGAAATGCCACCTTCGGCCTTAAACtgcctgaaaagttcaataaaGATTGGTACCAAGGTCAGCCTATCTGGCTGACTGCTATGTATAACAGATTAAAGGCTGCTACATTCTTCTGGCCTGGATCAGATGTGGCAATCAATGGGACCTACCCCAACTTCCACATTGAATATAACAGgAGTATCGCATTTGAAGAGAGGGTTGCAACTGTGTTTCGGTGGCTGAGTTTACCTGAAGCAGAAAGAGCTCAGTTTTACACGTTGTATTTGGAGGAGCCTGATGCTTCAGGGCATTGGTATGGACCAGTGAGCAGCGAGGTAATAATAGCCTTGAAGAAGGTGGACCAAATGGTGGGGCTGCTAATGGATGGCCTAAAACAGAGAGACTTGCATAGATGTGTTAACCTTATCCTTGTGTCTGATCATGgAATGGAAGAAGCCAGCTGCAAGACAGCTGAGTATGTGTCTAATTACATGGATGTAGACGACTTCACCGTAATACAAGGACCCGCTGCTCGAATTAGGCCGAACAATCTTCCTCAAGACTATTTCACTTttAACTACGAGGGCGTTGTGAAGAATCTGTCGTGCAGAAGTCCTGACCAGCACCTTAAGCCTTACCTCAAGCATCACCTTCCCAAGCGCTTCCACTTCGCCAATAACGTCAGGATCGAGAAAGCCCATCTGTACATGAAGCAGCGGTGGCAGGCAGCAGTGAAACCCAGAGCTCTGAAGTATTGCAAAGGAGGGTTCCATGGCTCAGACAATATGTTCAGCAATATGCAGGCAATTTTCATTGGCTATGGaccagaaataaaatcaaagaccGCTGTGGCACCCTTTGAAAATATTGAAGTCTATAACCTTCTCTGTGACTTGTTAAAAATCCCACCTGCCCCAAACAACGGGACTCATGGGAGTCTGAACCATATTCTGAAGAAACCGTTTTATAACCCGACCTACCCGGCAGAACTGTCTCCTCCTTTGGACTGTTCCCAGCAAGCATCTACAGTGGATGACCTGGGATGTTCATGCACTTCCTATACTAAGTCTCAGgtAGAAAGACTGAACCAACAGTTATTCATTGTGGAGAGTGaaatTTCAAAAGCCGAAACTTTGCACTTGCCATATGGACATCCAAGAGTTCTTCAGAGGGATGCCAGATACTGCgttttaaataatgttgacTACATCAGTGGATATAGCCAGGATCTGTTCATGCCTCTTTGGACTGCATATACTATTCATGTTTTAacaaatatcaGTTCCCTGAAGCAGGAAAGAGCAGACTGTTTACGAGCTGATCCTCGAATCCTGCCCGTCTACAGCCAGACCTGTACcagctacaaaaataataaaatcttcaAATTTGGCTTCTTCTATCCCCCTAATTTTGGGCCAAGCAGCAGAGAGCCTGACTCATTAATTACGAGCAACATTGTGCCAATGTACAATGCTTTTAAAGaTGTCTGGACCTACATTCATGACACGCTAATTGGGAAATATTCCAGAGAAAGGAATGGTCTGAATGTCATCAGTGGTCCTGTGTTTGATTATGACTTTAATGGACACTTTGATACCAAGGATATAATCCAAAAgAATGTCACAGACTCTAGGATTCCCATACCCACACACTATTTTCTGATTCTGACAAGCTGTATGAATTCCTCCTTCTCTCCTGCTCACTGTGAGGGACCTTTGGAGGCCGTCTCATTCGTTCTTCCTCACAGACCAGACAACAGCGAGAGCTGTGCTactgGAGAAAACTTTCTGTGGGTTGAGGATTGGTTGAAGTTCCACGTGGTTCGGGTGAGAGATATAGAACTACTAACTGGACTAAGCTTTTACCACAAACTGGGGTCAGTTACTGAAACTTTGCAGCTGAAAACCTTTTTACAGACGTTTCAGAGTGAAGACTAATGTCTGAATGAGAGTGTGCAAATATCTAAGtgcattttattcttattcaaattgaaattaattgatgtaatgttttgctctttttatatatatatatatatatatata

Function

GO:

id name namespace
GO:0005488 binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01513 ENPP1_3, CD203; ectonucleotide pyrophosphatase/phosphodiesterase family member 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004265 True 2907 mRNA 0.44 25 40570960 40598834

Neighbor

gene id symbol gene type direction distance location
AMCG00004255 NA coding upstream 322496 40235528 ~ 40248464 (+)
AMCG00004256 NA coding upstream 342129 40220524 ~ 40228831 (+)
AMCG00004254 aida coding upstream 376089 40184877 ~ 40194871 (+)
AMCG00004251 disp1 coding upstream 487432 40059946 ~ 40083528 (+)
AMCG00004248 NA coding upstream 516508 40037711 ~ 40054452 (+)
AMCG00004264 NA coding downstream 7620 40606454 ~ 40618190 (+)
AMCG00004266 NA coding downstream 123329 40722163 ~ 40729804 (+)
AMCG00004268 ints7 coding downstream 212552 40811386 ~ 40824981 (+)
AMCG00004267 lpgat1,LOC106607581 coding downstream 252397 40851231 ~ 40861765 (+)
AMCG00004277 LOC107712406 coding downstream 298616 40897450 ~ 40904733 (+)
G6850 NA non-coding upstream 371998 40148962 ~ 40198962 (+)
G6847 NA non-coding upstream 457009 40110200 ~ 40113951 (+)
G6840 NA non-coding upstream 482046 40088608 ~ 40088914 (+)
G6819 NA non-coding upstream 536637 40015267 ~ 40034323 (+)
G6807 NA non-coding upstream 625905 39944500 ~ 39945055 (+)
G7048 NA non-coding downstream 379165 40977999 ~ 40978319 (+)
G7078 LOC103376870 non-coding downstream 696464 41295298 ~ 41364066 (+)
G7084 NA non-coding downstream 768311 41367145 ~ 41368478 (+)
G7102 NA non-coding downstream 924219 41523053 ~ 41529308 (+)
G7101 NA non-coding downstream 1006276 41605110 ~ 41606759 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 229725 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 2723240 37832623 ~ 37847720 (+)
G6369 NA other upstream 3570802 36999357 ~ 37000158 (+)
G6328 NA other upstream 3679214 36861547 ~ 36891746 (+)
G6314 NA other upstream 3796437 36774001 ~ 36774523 (+)
G7094 NA other downstream 860742 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 1611596 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 2089945 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 4019351 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 5363176 45962010 ~ 45968306 (+)

Expression


Co-expression Network