AMCG00004266


Basic Information

Item Value
gene id AMCG00004266
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 40722163 ~ 40729804 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004266
TGAATAATCCGCGCTGTTTGGGAAGTTTTTTGTGCAATAAGTTAAACTCTTTTGGagtttaataatattgtaaatgcGACGATGATGAGGGAATCGCCTAGGTCTTATCAAGAGttGTACGATGAAGGGGATCGAGCTCAGACTAGTCCTCATGAGCAAGAATGTGTGGAAGACCTCGAGTCCGAAGATGGCAATGGGAGGACCTCACCAGCTGTGGACGACGAGGCCGGGAACAATAACCTTTCGATGGGGTTCAGCAAGACCTGCCTGAagaatgtgttttctgtgaTCCTCATCTTCATCTACCTGTTGCTGATGGCTGTGGCGGTGTTCCTGGCCTACCAGACCATCGCTGACTTCATGGAGAAGCTGAAACATCCTGTGATGTCCGTGACCTACAAAGAGGTGGACAGCTTTGAGGCTCCCGGGATTGCACTATACCCTGGCAAGGCCAGACTCCTGAGCTGTAAGCACCATTACCACAGCCACATCCCTCCTCTGGTCACACCGGGGCAGCCTGGAGATGTCAACTGTTTCACTGATCAAATCAACTACACCGATCCCTTCACCAATCACACCACGAAGCACGCTCTGGTTGTTCGAGGGCCCAGTTATGTCAGGAAGAGGGAGCTGATTTTTCTGCAGTTCAGCCAAAATGAAACTGAACAAGATTTCAGTGCCATCAATTACCTGCTTTTTTACTCCTTTAAGGAGTTTGCtggaagTGAAGACAAAGCCCAGTTCATGAAAGACTGCGAGAGATCCTACTCGATGTGGACCTTCTCCGGGGGGTTCCGCACCTGGGTCAAGATGTCCTTGGTGAAGACATCAGAGAAGGACGGCAGTGAGTCGGTGGAGTTCAGACAGGAGTCCAGCGTTGTGAAGTACAATGATCGGAGGAAAGACTCGGACAAAACAAATCAGCTCTTCTTTGTCGTTTTTGAGTGGAGAGACCCTTTTGTTCAGGAAGTCCGGGATATCATCACAGCAAACCCCTGGAAAACCATCGCCATCCTGTGTGGCATCTTCCTGGCTCTGTTCAAGGCGGCCGACTTTGCCAAGCTCAGCGTGAAGTGGATGATGAAGATTCGCAAGAGGCAGCTGAAACGCAGGAGCAGGGAGATGAACCAGGTCAGCTGAGCCGCTGGAGTGCAGAGGCGCCCTCCCTCTTCAGGCGCTTCCCTCCGAGCGGCCTGCTCCCGCCGTGCTCGGGGTGGGGAGACGGAGGCTGTGAACTGGTCTCTGGGATCGCAGCTGCTACGGGACTAGACAACCGGACCGGATTCAAGTTATGTGGAGTGACTACACAGTAATGAGAACATTGCGGTGACTTAAAACATCAACGTTGTGAACTATCTGACCCTTAATACCGCATCTAGGCCTTATTAACCCATTGAACAGTTTCTACTTGATCTGATTCCAAGAGGCAGCTGGATATTGCACTCAATAGCTCTCCTCTAGAGATATTAATGGCTGCGCTGCCTGAAACCCAAGTAGATGTCTGTTGAGTCTGCAGAATAGTGGAAAACACCCAAACACACGGTCTTATCGCTGTGTGGCTTCTGTTCTACAGTTAGGAGATCCTCAGGGGTGGTGTATGGAGGTGCTTTTGTCTCTGCTTGTGCCGCTCCCACACACAAAGTTTTGTAAACCACATGGAAAACGCAAACACTGAAGAGCACCAACGAGAACAATGTGCACTGAAATGTTTGTTACTGCTATTTTGTGCAATAGGCTACATTATCCCAGAGTATGAATCTTGTTTCTGATAAATGTACTGTTGATGGGTAACTTCAATGACATTACTGTGATCAGTGGGTCctgcatttttagatttttttaacatttctgtgCCTTTGTATATTACGCACAACTAGGATTTACTAAATTAAGTTATACTAATTTACTAGTCCTGTaacttaacaaaaaaataacaacctgttcacatttgaatacaaaatatgtaaataattagcATAGGTTGTCAATCTTAATCTTTGTATTGAAGGTcaactgaactgaaaactctTAAAAATaggcttttaatatttaatacattttaaaatgtcagcaaCAGAAGTGTAACAGTGGTGTAAGCCTAACACAAATGTAATATcaattaactctctctctctattctgttattttatgaGAAGTAGCACTTCCACACTAGGtgtaaggagagagagaggtcggTAGTTTCTGCAGGGCAGGGTAATGCTGTGCTCTGCTCCCACCATGTCACACAGCACTGGCAGGTTTCAGGCACTGAGCCGAGTAAAGCAATAGCACTTCtggcaaagcaaacaaacatcacaTTGTCTTAATACTAAATAAggattcctttgttttgttttttctctttcctctgtTCGTTTGACCTTTCAGGGTCCgtttgatttctttttaattatttaattaatagaatTACATTTCTTGATCTTTTTGATTGTCATGTCTTATACAATATGCTGTGTTATCTAAGATTGTAAATGTCTGTCAGTGACcgtatataatatacattagtCAAATCTAGAGAATAGATTCATTAACACTGGAGTCGTGTATAGAGaaagtaacaaacaaaacaaaaacctctgtGACGATAAACTGGAAAACGAATCTTTGTAGCGGGGTTTGTTTTGAGTGATATTCCTgccattatattatatacagagaggaagagaacaAATTTTTCACCTGGGATATACTTGAACTCATAACAGTTAAAACAATCCATTAATGTCTACCTCTCACTAATTCTTAAACTAACTTGGAAAGTTCCTAAGGCACGCTGTACAGGGATCTGGTCCTTTGTTTGTGCGGAGATTTCAAGCATGTCAAATTACTGAAAAGCAATTTGATATCCCTGAACAGACACCCTTGTGTCTTGTTAGATTATTTCTCAGGTAACATGCTGAGTCACAGGCCATTCTTAAAGCTATACAAGGAGCCGGTTTGAATAATGGACacaattttgaaatacagtGCTCACCAAAGGcttttatgtaaattgtatataaattatgtttttgtgtatttctaatacatttagaatacaatatatacatatgtgagTATTCCATATGGGCTGATGCGAGGATATTTATGTTAGGTGttagggaagaaaaaatattaattcccAACTATTTGTCTGACATTTGTggattacaaaatgtaaagccCTTTAAGTGTGACTGTGAAATActacttttaacatttttccttttttgtaaaaccttaCCTTTAAGCCTGTATTATCTTTTCAGTGGCAAGctggtaataaaaaaaatgattacacTCGACTTCTAAAGCACACCTCGTGTTGGTTCTGGGTTCCTCGGGTGTTGAACATGCAGTAAAGGCAAGTAACATCTTCAGCTCTAAGTAGAAACATAAGGTAGACTTTATTTGATGGTGTTCAAAACCCCCATGAAGGTCTTTcattacaaaacagtttttccACACAATTGTATGTTAACAGAGATTGGAATGGTACTCTGACAGAAGGCATCAGAAAGACTAGAATACAGACGTACATCTTTTCACTGCTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004266 True 3557 mRNA 0.42 8 40722163 40729804

Neighbor

gene id symbol gene type direction distance location
AMCG00004264 NA coding upstream 103973 40606454 ~ 40618190 (+)
AMCG00004265 NA coding upstream 123329 40570960 ~ 40598834 (+)
AMCG00004255 NA coding upstream 473699 40235528 ~ 40248464 (+)
AMCG00004256 NA coding upstream 493332 40220524 ~ 40228831 (+)
AMCG00004254 aida coding upstream 527292 40184877 ~ 40194871 (+)
AMCG00004268 ints7 coding downstream 81582 40811386 ~ 40824981 (+)
AMCG00004267 lpgat1,LOC106607581 coding downstream 121427 40851231 ~ 40861765 (+)
AMCG00004277 LOC107712406 coding downstream 167646 40897450 ~ 40904733 (+)
AMCG00004276 slc30a1a,slc30a1 coding downstream 176588 40906392 ~ 40921474 (+)
AMCG00004278 NA coding downstream 208781 40938585 ~ 40940764 (+)
G6850 NA non-coding upstream 523201 40148962 ~ 40198962 (+)
G6847 NA non-coding upstream 608212 40110200 ~ 40113951 (+)
G6840 NA non-coding upstream 633249 40088608 ~ 40088914 (+)
G6819 NA non-coding upstream 687840 40015267 ~ 40034323 (+)
G6807 NA non-coding upstream 777108 39944500 ~ 39945055 (+)
G7048 NA non-coding downstream 248195 40977999 ~ 40978319 (+)
G7078 LOC103376870 non-coding downstream 565494 41295298 ~ 41364066 (+)
G7084 NA non-coding downstream 637341 41367145 ~ 41368478 (+)
G7102 NA non-coding downstream 793249 41523053 ~ 41529308 (+)
G7101 NA non-coding downstream 875306 41605110 ~ 41606759 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 380928 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 2874443 37832623 ~ 37847720 (+)
G6369 NA other upstream 3722005 36999357 ~ 37000158 (+)
G6328 NA other upstream 3830417 36861547 ~ 36891746 (+)
G6314 NA other upstream 3947640 36774001 ~ 36774523 (+)
G7094 NA other downstream 729772 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 1480626 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 1958975 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 3888381 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 5232206 45962010 ~ 45968306 (+)

Expression


Co-expression Network