AMCG00004293


Basic Information

Item Value
gene id AMCG00004293
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 41652615 ~ 41666407 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004293
AATGATTGAAGAGGGAGGAAAACGAGGCAAGACTATGGCTGAGAAGAGACAGCTTTTCATGGAGATGAGGGCCCAGAATTTCGATGTCATCAGGCTCTCGACGTACAGGACGGCCTGCAAGCTGAGATTTGTGCAAAAACGATGCAACCATGTCTGGAACATGATAGAGGCCTTTCGAGATAATGGCCTCAACACACTGGACCACAACACAGAAATCAATGTCTCCCGTCTGGAAACAATTATCTCTTCCATTTACTATCAGCTTAACAAACGACTTCCAACTACTCATCAGATCAGTGTGGAGCAGTCCATCAGCCTGCTGCTCAACTTCATGATAGCTGCGTATGACAGTGAGGGCCATGGCAAATTGACAGTGTTCTCCGTGAAAGCTATGCTGGCTACCATGTGTGGTGGCAAAATAGTGGACAAACTGCGGTacGTGTTTTCTCAGATCACAGACTCCAGTGGAGTGATGATATTCACGAAGTTTGATCAGTTTTTGAGAGAGGTGCTGAAGCTCCCAACTGCAGTGTTTGAAGGTCCTTCTTTTGGGTACACAGAGCACTCCGTACGAACTTGTTTTCCACATCAGAAGAAGATAATGCTGAATATGTTTTTAGACGCGTTAATGGCCGACCCGCCACCACAGTGCCTGGTTTGGTTACCTCTCATGCACCGACTCGCCAATGTGGAAAATGTCTTCCATCCGGTGGAATGTTCTTACTGTCGTAGTGAAAGTATGATGGGTTTTCGTTACCGATGCCAACAGTGCCACAATTACCAGCTCTGCCAGAACTGCTTTTGGCGTGGGCATGCCAGCGGCCCCCACAGCAACCAGCATCAGATGAAGGAGCATTCGTCTTGGAAATCCCCAGCGAAGAAGCTAAGCCATGCGATAAGTAAGTCGCTAGGATGTGTCCCCAGCAGAGAACCACCACATCCTGTGTTCCCAGAGCAACCAGAAAAACCACTTGATTTGGCGCATATAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004293 True 991 mRNA 0.48 8 41652615 41666407

Neighbor

gene id symbol gene type direction distance location
AMCG00004292 NA coding upstream 51641 41568409 ~ 41600974 (+)
AMCG00004291 NA coding upstream 101646 41543076 ~ 41550969 (+)
AMCG00004289 LOC107593268,LOC107719402,LOC107697206,LOC107721442,LOC107690993 coding upstream 135225 41464947 ~ 41517390 (+)
AMCG00004286 hadha,LOC102787580,LOC102203549,LOC100703423,LOC100304971,LOC106603767,LOC107594700 coding upstream 264992 41376868 ~ 41387623 (+)
AMCG00004280 LOC105908978 coding upstream 640857 41000647 ~ 41011758 (+)
AMCG00004294 dtnb,LOC108412184,LOC106603664 coding downstream 38703 41705110 ~ 41730436 (+)
AMCG00004295 NA coding downstream 163332 41829739 ~ 41852260 (+)
AMCG00004297 LOC106603656 coding downstream 229844 41896251 ~ 41916088 (+)
AMCG00004296 NA coding downstream 282964 41949371 ~ 41964474 (+)
AMCG00004299 mapre3b,LOC107392001,LOC100704238 coding downstream 344278 42010685 ~ 42024740 (+)
G7101 NA non-coding upstream 45856 41605110 ~ 41606759 (+)
G7102 NA non-coding upstream 123307 41523053 ~ 41529308 (+)
G7084 NA non-coding upstream 284137 41367145 ~ 41368478 (+)
G7078 LOC103376870 non-coding upstream 288549 41295298 ~ 41364066 (+)
G7048 NA non-coding upstream 674296 40977999 ~ 40978319 (+)
G7182 NA non-coding downstream 299607 41966014 ~ 41966233 (+)
G7221 NA non-coding downstream 399090 42065497 ~ 42067725 (+)
G7231 NA non-coding downstream 421384 42087791 ~ 42089653 (+)
G7272 sod2,LOC102787761 non-coding downstream 667018 42333425 ~ 42336643 (+)
G7278 NA non-coding downstream 698461 42364868 ~ 42365654 (+)
G7094 NA other upstream 145384 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 1311380 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 3804895 37832623 ~ 37847720 (+)
G6369 NA other upstream 4652457 36999357 ~ 37000158 (+)
G6328 NA other upstream 4760869 36861547 ~ 36891746 (+)
AMCG00004304 NA other downstream 544023 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 1022372 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 2951778 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 4295603 45962010 ~ 45968306 (+)
G7999 NA other downstream 6480481 48146888 ~ 48147156 (+)

Expression


Co-expression Network